Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01705 ATGCCGTCGGACTCCGGCGACCGACGCTCGGTGAGACTCCAACCCCTCAGTGGTTCGCCCCCTGAGCACGAGCATCTCCCGTGCCCACGCTGCAACTCCATCAACACCAAGTTCTGTTACTATAACAACTACAACCACTCCCAGCCCCGTCACTTCTGCAAGTCCTGCCGCCGTTACTGGACCCAAGGCGGCACCCTCCGCAACATCCCCGTTGGTGGCGGCAGCCGCAAGAACGCTAAGAGGTCCCGCACCTCCCCCGCCTCTCATGACCCAATACGCGCCACCACTATCTCCGTATCTCCCGCCGGCGAACACGACATGTCCGTACCGTTACGTGGCGACGTTGACTTACCCGCAAGTTTCACTTCCTTGCTCAACACGCAGGGTCCTGGGTTCTTCGCGCTTGGTGGGTTCGGTCTAGGGCTTGGGTCAGGGTTTGAAGACATGGAGTTTGGGCTCGGGCGAGGGGTTTGGCCCCTCTCGGAGGATGGCGAAGGTGGTGTTTGTGGTGGCTACACGTGGCATCTTGGTAGCAGTGGTGACGGTGGTATCGTGGACGGTGATTGGTTTTCTTGGCCAGAGCTTACTACGAGGGGAAAACGTCTCAAGTGA 612 0.5964 MPSDSGDRRSVRLQPLSGSPPEHEHLPCPRCNSINTKFCYYNNYNHSQPRHFCKSCRRYWTQGGTLRNIPVGGGSRKNAKRSRTSPASHDPIRATTISVSPAGEHDMSVPLRGDVDLPASFTSLLNTQGPGFFALGGFGLGLGSGFEDMEFGLGRGVWPLSEDGEGGVCGGYTWHLGSSGDGGIVDGDWFSWPELTTRGKRLK* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01705 203 MobiDBLite consensus disorder prediction 1 26 - -
Eupl03g01705 203 MobiDBLite consensus disorder prediction 67 91 - -
Eupl03g01705 203 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
Eupl03g01705 203 Pfam Dof domain, zinc finger 25 80 IPR003851 GO:0003677|GO:0006355
Eupl03g01705 203 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 90 IPR045174 GO:0003700|GO:0006355
Eupl03g01705 203 ProSitePatterns Zinc finger Dof-type signature. 28 64 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01705 Eupl-Chr3 44842202 44843295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01705 1 203 C2C2-Dof Transcription Factor Family AT3G50410 44.269 3.91e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl03g01705 zf-Dof 3.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01705 - - nnu:104601962 258.07