Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01691 ATGATTCAAGGGCTGTTGGGAGGTGCAGGAATACTAGGAGGGGAGAGAAAAATCTCCATTAATGGTGGAGTTTTAGAAGGATCACCTTCTTCTTCACCTTCTCCTTCTCCTTCATCTTCTACAACAACTACAACTACTACTGCTGCTGCTACTACCTCATCTTCAGATCAACAAAATTTGAGGTGCCCAAGATGTGATTCTTCCAACACTAAATTCTGTTACTACAACAACTACAACCTCACTCAGCCTCGACACTTCTGCAAGACCTGCCGACGATACTGGACTAAAGGCGGTGCACTTCGCAATGTTCCGATCGGAGGTGGCTGCCGGAAAAATAAGAGCACGACTGTGTCGACCACTGCTGGAAAATCGAACGCGGGAAAAATCAAAACAGCATCGTCGGACATCGTTAAATCGAACCTTGGAAGTGGGTTCGATCATGAGCCGTCCTCTAACCCAATTCTATGGGCTTCGCCACATAATTCTCAACTGTTGGCCTTACTGAGAGCCAGCCAAAACCATAACCCTAACCCTAACCCTAATCCCATATCCAATTCTGTTAGCATAAAGGATGAGGGTGCTATGATTGGATCCCATATTACTTCGGAGTCAGCAGTAGCGACAGGTGCATTAAATGCACGATCCCTAAACCTAGATCATCATATGGATCAGGTTCCTATTGGTCTGTGCAGCAATTTTTGGAGAAACAATCAACAGCATCATAACCAACAGCAGCAGCACCACCACCACCAACATAGCTTGTTAATGGGTCATGAAGTTCAAAACTCGGGGATTCAAGAGCTTTATCAACGGCTCAGATCATCAGCGAATTACTACACTGATCATTCACCTGCAATATTAAGCAATATGAATGCTTCGACATCAGCTTCTTCTTCGTCCATCTTCGAACCAGCTCCAATTGCTGGAGGAGAATTGGGTTACTGGAATCCGCCGTATTCATGGTCTGATCTACAGACAACCCATGGTGCATTTCCTTAA 999 0.4515 MIQGLLGGAGILGGERKISINGGVLEGSPSSSPSPSPSSSTTTTTTTAAATTSSSDQQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSTTVSTTAGKSNAGKIKTASSDIVKSNLGSGFDHEPSSNPILWASPHNSQLLALLRASQNHNPNPNPNPISNSVSIKDEGAMIGSHITSESAVATGALNARSLNLDHHMDQVPIGLCSNFWRNNQQHHNQQQQHHHHQHSLLMGHEVQNSGIQELYQRLRSSANYYTDHSPAILSNMNASTSASSSSIFEPAPIAGGELGYWNPPYSWSDLQTTHGAFP* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01691 332 ProSitePatterns Zinc finger Dof-type signature. 62 98 IPR003851 GO:0003677|GO:0006355
Eupl03g01691 332 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 49 262 IPR045174 GO:0003700|GO:0006355
Eupl03g01691 332 Pfam Dof domain, zinc finger 58 114 IPR003851 GO:0003677|GO:0006355
Eupl03g01691 332 MobiDBLite consensus disorder prediction 22 60 - -
Eupl03g01691 332 ProSiteProfiles Zinc finger Dof-type profile. 60 114 IPR003851 GO:0003677|GO:0006355
Eupl03g01691 332 MobiDBLite consensus disorder prediction 24 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01691 Eupl-Chr3 44644321 44645319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01691 29 115 C2C2-Dof Transcription Factor Family AT5G65590 66.292 3.57e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl03g01691 zf-Dof 2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01691 - - vvi:100244391 415.616