Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01677 ATGGATCGATCTGCAGTTACCGTCGGTCCTGGCATGGATATGCCAATAATGCACGACAGCGATCGGTATGAGCTCGTTAGAGATATCGGTTCGGGGAATTTTGGCGTGGCGAGGTTGATGAGAGATAAGCAGACTAGAGAACTCGTCGCTGTGAAGTATATCGAAAGAGGCGAAAAGATAGATGAAAACGTTCAAAGGGAGATAATTAACCACAGATCACTGAGGCACCCCAACATCGTTAGGTTCAAAGAGGTCATATTAACGCCAACCCACCTGGCTATTGTAATGGAATATGCATCCGGTGGAGAGCTTTTTGAGCGTATATGCAATGCAGGCCGCTTCAGTGAGGACGAGGCGCGCTTCTTCTTCCAACAACTCATATCAGGAGTTAGTTATTGTCACTCAATGCAAGTATGTCACCGTGACCTGAAGCTGGAAAACACGCTGTTGGATGGAAGCCCAGCTCCTCGTTTGAAGATATGCGATTTTGGATACTCCAAGTCGTCGGTGCTGCATTCTCAACCAAAATCAACTGTCGGCACTCCTGCATACATAGCTCCAGAAGTATTACTCAAGAAGGAGTATGATGGAAAGATTGCGGATGTGTGGTCATGTGGGGTAACCCTGTATGTCATGCTAGTGGGTGCATACCCTTTTGAGGATCCAGAGGAACCCAAGAACTTCAGGAAGACAATACAGCGAATTTTGAGTGTCCAGTATTCAATTCCAGATTATGTTCACATTTCTCCCGAGTGCCGCCACCTGATCTCAAGGATTTTTGTTGCCAACCCTTCAACGAGGATAACCATTCCTGAGATTCGGAACCATGAGTGGTTTCTAAAGAACCTCCCAGCAGACCTCATGGATGAGAACACAATGAACAACCAGTTTGAAGAGCCTGATCAACCCATGCAGAGCATTGACGAAATCATGCAGATCATTGCCGAGGCCACCATACCCGCTGCTGGAACCCGTGGCCTCAACCAGTATCTGACGGGCAGCCTGGACATCGATGATGACATGGAGGACCTGGAGACTGATCCCGATCTTGACGTTGACAGCAGTGGGGAGATAGTCTATGCAATGTGA 1089 0.4784 MDRSAVTVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKQTRELVAVKYIERGEKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIQRILSVQYSIPDYVHISPECRHLISRIFVANPSTRITIPEIRNHEWFLKNLPADLMDENTMNNQFEEPDQPMQSIDEIMQIIAEATIPAAGTRGLNQYLTGSLDIDDDMEDLETDPDLDVDSSGEIVYAM* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01677 362 Gene3D Transferase(Phosphotransferase) domain 1 99 287 - -
Eupl03g01677 362 CDD STKc_SnRK2-3 22 278 - -
Eupl03g01677 362 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Eupl03g01677 362 PANTHER SERINE/THREONINE KINASE 22 305 - -
Eupl03g01677 362 FunFam Serine/threonine-protein kinase SRK2E 99 287 - -
Eupl03g01677 362 SUPERFAMILY Protein kinase-like (PK-like) 15 309 IPR011009 -
Eupl03g01677 362 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Eupl03g01677 362 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
Eupl03g01677 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Eupl03g01677 362 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01677 362 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01677 362 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01677 Eupl-Chr3 44520167 44527884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01677 22 308 CBL-interacting serine-threonine protein kinases AT4G24400 43.522 5.19e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Eupl03g01677 Pkinase 2.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01677 K14498 - nnu:104595879 704.901