Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01674 ATGGGTTCAACTTCGCCGGAACTGAGCTTAGATTTCAAACCAACGTACACACCCAAAACCATTACCGTTTTTCTGAGAGAGATTTCAATGATCGGAAACGTTTCCGAGAGGTCATCGAAGCTCGACGAGTATGTTAAGAGGTTAGAAGAAGAAATGAGGAAGATCGATGCTTTTAAACGCGAGCTTCCTCTCTGTATGCTCCTTTTAAACGATGCTATTGTAGCAATGAAGGAGGAAACAATGCAGTGTACTACAAAGTCTGATGTTCGACCTGTAATGGAAGAATTCATTTCCTTAAAGCGAAATTCTGATGAAGATAGAGGGTTAGAAAATGAAAAAGAAACCAAAGATAAGGAGAGCTGGATGAGCTCTGCTCAGCTCTGGAGCAATAATGATTATTCTACTACTAATACAAATTACGATAAGAAGCAAAAATCAGTAGAAGTGAGAGAGAGAGCTGAAGAAGACGATCGGTCTGCAACTGAGAATCCGATTTCTCTATGTAAATATATGAACGGGGGAGGGGCATTTATGCCATTTAAGGGATTTTCTGGTTTTCCAACAACAACCACAAAGGAAGACAAAGAGATTCAATCGGTATCAGGCCTTTCTCTTTTGACCCCTGGAATTAAGACTTCAAGGGCTGAACCAAGCTCTGGTCTTTTGAATTCTAAGAGCAGCGGCGGTACCAGAGCAGTTCCGTCTTCATGGACCGTGGGCGGTCAGTCGAATTTACATACGGCAACACAACAGCCTCCGAGGAAGCAAAGGCGATGTTGGTCGCCGGACTTACATCGGCGTTTCATCAATGCCCTGCACCATCTTGGAGGTTCTCAAGTGGCAACTCCAAAACAAATTAGAGAACTTATGAAGGTTGATGGCTTGACCAACGATGAAGTGAAGAGCCATTTGCAAAAATACCGACTTCATACCCGAAGAATTCCAGCTGCTTCAACCCCTGCGAATCAACAACAAGTTGTTGTTTTGGGAGGATTATGGATGCCCCAGGATCAGTATGGGACGTCGAAGCCGAGCAGCTCCCAATCTGGGTCTCCCCAAGGCCCCCTTCAGTTAGCAGGGGTTGCTGGAGGGATCTCCACTATGGGAGGTGACAGCATGGAAGACGAAGAAGATGGAAAATCAGAGAGCTACAGTTGGAAAGGTCACCTTCACAAATCAGGCGAAGATGATGTATAA 1197 0.4478 MGSTSPELSLDFKPTYTPKTITVFLREISMIGNVSERSSKLDEYVKRLEEEMRKIDAFKRELPLCMLLLNDAIVAMKEETMQCTTKSDVRPVMEEFISLKRNSDEDRGLENEKETKDKESWMSSAQLWSNNDYSTTNTNYDKKQKSVEVRERAEEDDRSATENPISLCKYMNGGGAFMPFKGFSGFPTTTTKEDKEIQSVSGLSLLTPGIKTSRAEPSSGLLNSKSSGGTRAVPSSWTVGGQSNLHTATQQPPRKQRRCWSPDLHRRFINALHHLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRIPAASTPANQQQVVVLGGLWMPQDQYGTSKPSSSQSGSPQGPLQLAGVAGGISTMGGDSMEDEEDGKSESYSWKGHLHKSGEDDV* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01674 398 MobiDBLite consensus disorder prediction 338 398 - -
Eupl03g01674 398 MobiDBLite consensus disorder prediction 379 398 - -
Eupl03g01674 398 FunFam Myb family transcription factor 254 312 - -
Eupl03g01674 398 Coils Coil 41 61 - -
Eupl03g01674 398 Gene3D - 254 312 - -
Eupl03g01674 398 NCBIfam myb-like DNA-binding domain, SHAQKYF class 255 310 IPR006447 GO:0003677
Eupl03g01674 398 MobiDBLite consensus disorder prediction 103 120 - -
Eupl03g01674 398 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 7 387 IPR044787 GO:0003700|GO:0006355
Eupl03g01674 398 MobiDBLite consensus disorder prediction 121 142 - -
Eupl03g01674 398 SUPERFAMILY Homeodomain-like 253 313 IPR009057 -
Eupl03g01674 398 MobiDBLite consensus disorder prediction 211 256 - -
Eupl03g01674 398 MobiDBLite consensus disorder prediction 103 161 - -
Eupl03g01674 398 Pfam Myb-like DNA-binding domain 257 308 IPR001005 -
Eupl03g01674 398 MobiDBLite consensus disorder prediction 338 355 - -
Eupl03g01674 398 MobiDBLite consensus disorder prediction 143 161 - -
Eupl03g01674 398 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 253 312 IPR017930 -
Eupl03g01674 398 MobiDBLite consensus disorder prediction 211 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01674 Eupl-Chr3 44473735 44475967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01674 3 335 G2-like Transcription Factor Family AT2G03500 39.601 3.71e-63 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl03g01674 Myb_DNA-binding 3.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01674 - - nnu:104601936 566.229