Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01671 ATGGCGTCGTCATCGAATGCTCCCTGTGCGGCGTGCAAGTTCCTCCGGCGCAAGTGCACGCACGAATGTGTATTTGCTCCCTACTTTCCACCGGACAACCCACAGAAGTTTTCTAACGTCCACAGGGTGTTCGGTGCAAGCAACGTGGCTAAGCTTCTGAATGAACTACACCCAACACACCGAGAGGATGCCGTGAACTCGCTCGCCTACGAAGCCGAGGCCCGGCTCCGTGATCCCATTTACGGCTGCGTGGGCCTTATCTCCGTCCTCCAACACAAACTCAAGCAGGTCCAGCACGATCTATGCCACGCCAAGAAAGAGCTCACAGGCTACATTGGTCCAGCGGGTATGCTTCCCCTCACCCAGCAACAGCAGCATCATCAACAGATGATGCAGAACCCCCACAACGCTTCCTCCTCAATGGGCCCATTTGGGTTTGTTTCAATGGCCTTGGGCCTCCCCCAACCCCAAGGGCCTTCTCCCCAAGCACAGTTAATCATTCGAGAGCAGCAGCATCACCTTCACAATCAGATGCTCGAGGCGCAGCAAATGGCCGCTGCGGTTGCTGCAAGAGAGCAGGAGATGTTGAGGAACTACCAGCAGCAACAACAATATCAGCAGCAGCAGCAGCAACAACAACGACATCAGCAGCAGCGGCAGCGGCAGCGGCAGCAGCAACAACATCAGCAGCAGCAGCAGCAGCACAGCAGCAGCAACATCAGCAGCAGGAACTTGAGAGGATCAATAGCGGGTTCGATGTGGGCGGTGGATCAGGTGGTTTTAATAATCCAATTAATGCCGGTGTGCCGTTTGAAAACTTGTTTCAGGTGCAGCAACAAGAGCACCAGCAACAGCAATTACAGGCGCAACCAGTACCACAGCAGAGAGCGGGGAGCGATGAGGGTCGGACCGTTCCATCTCCGAAAATGTCTCCTTAAGTCCCGTTCCGCTTCGTTCTCTCCGTCTCTCAATCCTCCTTTCTCGGTACACACTCTCTGA 999 0.5495 MASSSNAPCAACKFLRRKCTHECVFAPYFPPDNPQKFSNVHRVFGASNVAKLLNELHPTHREDAVNSLAYEAEARLRDPIYGCVGLISVLQHKLKQVQHDLCHAKKELTGYIGPAGMLPLTQQQQHHQQMMQNPHNASSSMGPFGFVSMALGLPQPQGPSPQAQLIIREQQHHLHNQMLEAQQMAAAVAAREQEMLRNYQQQQQYQQQQQQQQRHQQQRQRQRQQQQHQQQQQQHSSSNISSRNLRGSIAGSMWAVDQVVLIIQLMPVCRLKTCFRCSNKSTSNSNYRRNQYHSRERGAMRVGPFHLRKCLLKSRSASFSPSLNPPFSVHTL* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01671 332 MobiDBLite consensus disorder prediction 210 244 - -
Eupl03g01671 332 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Eupl03g01671 332 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Eupl03g01671 332 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 132 - -
Eupl03g01671 332 Coils Coil 205 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01671 Eupl-Chr3 44441906 44444827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01671 1 199 AS2 family AT5G66870 56.075 3.46e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl03g01671 LOB 9.1e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01671 - - ming:122073025 261.151