LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl03g01669	ATGCCTTGGTGGCAGAGCGCCCTTCCTCCCTTTTCGTCTCCCAATTCCTCCAATGGTTCTCCTAAGAGACGCAATGTCAGGGACATCAATTTTTTCTTCCGGAACCGTAGGAGATCACGCTCGCAGCCGCGCCTCACTCGACAACGGAAGCTTCGGCACCTCAGCGATCATGACGTTGGCCATCTGCCCATGAGTAATCAGTTCCATCCATTGGAAGATTCGACACCGGTGTCGCTTTCTCAGAGCAGTCTTGACCGCTGCTCTTCCCGGTCTTCTTCAGTCGTGCCGCTGCCGTTGCCGCTCCCCTACGGGTCCTCGTCTTCGAATTCGGGGCATTGTCCTCTCCCTTCGCCCAAGGAGGCGCCGAGTAGATGGGATGGAGAGGAGTGCGATAGAACGGATTCTTCGATTGGAGACGGGACCAGGGAAGGGGTTCTTTCGAGCTCTGCAATAGGGAGGAGGTTTGCTTATGAGACAATCCAAAACACAGAGCATATTGACACACTGTCAGCCAAATCTCCAATTGATCGTGGTAAGAAGGTGCGTCAAGATCTAAATGGTGTTGGAACTGTTCAAAACAGCTTCTTGTGGAATGTTCCTGCTAATAGTAATCCAGCCAGTGGTTTCTCAAGTCCTGGACGTAGCCCTCGAAGATTGAGTGGCAGGGATCTTTTTCATCCTCCTTATGTGTCTTCTCTAGGATTTCAAGTTTGGTCAGCACCAGAGTTTCCAGCTTCAGATATGCTTGCAGGCTTCTCTTCCCAAACTTCACCAGATAAAACTATGTCTTGTCCTGAACACTCTCCCCTTCATAGTCCAAGAATAAAAAGTCTTTTCCTGAATCCCAGAAGTCCAAGTGGAGCTGCATCTCCAATGCATCACAAATTATCTCCAGAGAGCTCTACAGCATGGCATGACAGTAATGGTCATGTCACTGTCCACCCTCTACCCCTTCCTCCAGGAGCTGCAATACCTTCACAGCCAGCTTCTGTTCATCAAATTATTGTTAGACCGGAGGTATCATCAATGACAAATCAATGGCAAAAAGGAAGGCTTATTGGAAGTGGTACATTTGGAAGTGTCTATGTTGGCACCAATCGGGAAACTGGAGCTTTGTGTGCAATGAAAGAAGTCAATCTAATTCCTGATGACCCAAAATCTGCCGAATGTATAAAGCAATTGGAGCAGGAAATTAAAGTTCTTAGCCGATTAAAGCATCCAAACATTGTGCAGTATTATGGCTGTGAACTAGTGGAGGATCGGTTCTACATATATTTGGAGTATGTTTATCCTGGTTCAATTAATAAATATGTCCGTGACCATTGTGGAGCCATTACAGAACCTATGGTTCGCAATTTCACCCGTCATATTCTCTCTGGATTGGCTTACTTGCATAGCAAAAAGACAATCCATAGGGACATCAAAGGCGCAAATTTGCTTGTCGACCCATTTGGTGTTGTTAAGCTTGCTGACTTTGGGATGGCAAAACATCTTGGTGGACAGACAACTGATCTTTCTATGAAGGGAAGTCCATACTGGATGGCTCCGGAGATCATACAGGCTGTGATGCAGAAAGATACTAGCTGTGATCATGCTCTTGCTGTTGACATATGGAGTTTGGGGTGCACTATTATTGAGATGCTGAATGGGAAACCTCCTTGGATTGAGTTTGAAGGGGCTGCAGCTATGTTTAAGGTTTTGAAGAAATCTCCTCCCATACCAGAAACATTATCAATAGAGGGCAAGGAGTTCCTGCAATGTTGCTTTCAAAGAAATCCTGCAGAAAGGCCATCAGCAAGCAAGTTGCTAGAGCATCCCTTTGTAAGAAACTCCCACCAGCTGGAAGTTCCTGCTTGCGCACAAGCATTTGCTGGAATGAAACTGGTGGATGTAGCACATGGTCCAAGAGAGTCGACTAATCGTAAAGTTGATCTGATGCCAATCTCTCCAGGCACACTGGGCAGAAAAGGAAAACTGCCATCTAATGGTGAGACTGGTCAACAATCTCATCCTGAAACTTCCGACTCCACAGCGGCTTCTCGTCATTCTCCTCGTTCAACCCTTGAGGCACTTCCTAGTTTATCTCCTCCGCACCCAAATCACAGCACTCATGATTCCAAATCTTCTCCAAATGGGCTCAATAGTGTACAGCTGAGCTCTGGGAACAACTGCACTTCCGCTCATCCAAGGACTAATAGCAGGGAAGTCCCGCACCTTTTCTGA	2223	0.4687	MPWWQSALPPFSSPNSSNGSPKRRNVRDINFFFRNRRRSRSQPRLTRQRKLRHLSDHDVGHLPMSNQFHPLEDSTPVSLSQSSLDRCSSRSSSVVPLPLPLPYGSSSSNSGHCPLPSPKEAPSRWDGEECDRTDSSIGDGTREGVLSSSAIGRRFAYETIQNTEHIDTLSAKSPIDRGKKVRQDLNGVGTVQNSFLWNVPANSNPASGFSSPGRSPRRLSGRDLFHPPYVSSLGFQVWSAPEFPASDMLAGFSSQTSPDKTMSCPEHSPLHSPRIKSLFLNPRSPSGAASPMHHKLSPESSTAWHDSNGHVTVHPLPLPPGAAIPSQPASVHQIIVRPEVSSMTNQWQKGRLIGSGTFGSVYVGTNRETGALCAMKEVNLIPDDPKSAECIKQLEQEIKVLSRLKHPNIVQYYGCELVEDRFYIYLEYVYPGSINKYVRDHCGAITEPMVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDPFGVVKLADFGMAKHLGGQTTDLSMKGSPYWMAPEIIQAVMQKDTSCDHALAVDIWSLGCTIIEMLNGKPPWIEFEGAAAMFKVLKKSPPIPETLSIEGKEFLQCCFQRNPAERPSASKLLEHPFVRNSHQLEVPACAQAFAGMKLVDVAHGPRESTNRKVDLMPISPGTLGRKGKLPSNGETGQQSHPETSDSTAASRHSPRSTLEALPSLSPPHPNHSTHDSKSSPNGLNSVQLSSGNNCTSAHPRTNSREVPHLF*	741

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Eupl03g01669	740	MobiDBLite	consensus disorder prediction	661	690	-	-
Eupl03g01669	740	MobiDBLite	consensus disorder prediction	1	93	-	-
Eupl03g01669	740	ProSiteProfiles	Protein kinase domain profile.	347	608	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Eupl03g01669	740	SMART	serkin_6	347	608	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Eupl03g01669	740	MobiDBLite	consensus disorder prediction	68	93	-	-
Eupl03g01669	740	MobiDBLite	consensus disorder prediction	635	740	-	-
Eupl03g01669	740	SUPERFAMILY	Protein kinase-like (PK-like)	330	629	IPR011009	-
Eupl03g01669	740	MobiDBLite	consensus disorder prediction	105	144	-	-
Eupl03g01669	740	Gene3D	Transferase(Phosphotransferase) domain 1	343	632	-	-
Eupl03g01669	740	MobiDBLite	consensus disorder prediction	122	138	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl03g01669	Eupl-Chr3	44399691	44412402	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl03g01669	21	647	MAP Kinase Kinase Kinase	AT5G66850	49.398	0.0	531

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Eupl03g01669		Pkinase	1.1e-66	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl03g01669	-		K04420	tss:122661347	887.1

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