Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01655 ATGGTGGCTATTGCTGGTACTTTGCAATTTTCCCATGAACTGGGAATTTGCAAGAACCATGGGTGCACTAACAAATTTAAGAGTGTGGTGGGAAGAGGTCAATTACATTTATGTCATGTAGCCCTTTCATCACATGCTTCGCGACGGGATGCTTTGAGTCTCCATCTTTCAGACTGTGTATACTGGCCAATACGTCCTGTACCGTCCAGATGTACTGTTTTCATGTGTCGATCTTTTCTAATACCAGGTCGAGCAAATGAGATTCGCATTCTGAAAGCAGCTGCCACGGCTTTGACAAGGTCATATAATGCTTTTCGTGGAAGTCCTCTTGTACTGCAATTGGTCCCAGCAGTTGGTATCATAGCTTTTGCCTTATGGGGTCTAGGGCCACTCATGCGTCACAGCAGGAACATGTTCTTCCATCGTAACGACAGTAGTTGGAAAAAGAGTAGCACACATTATGTTATGACCTCCTACGTTCAACCTTTGCTGCTGTGGACAGGAGCAACTCTTGTCTGCAGGGCACTGGATCCAGTAGTTCTACCTACAGAAGCTAGCCAGGCTGTTAAACATCGTCTTTTGAATTTTGTAAGATCATTATCAACTGTGCTGGCCTTAGCGTTTTCTCTATCAAGCTTGATTCAACAAGGTCAGAAATTCTTTATGGAGACGAATGACTCCAATGATACCAGAAATATGGGTTTCCAATTTGCAGGGAAAGCTGTATATACTGCAGTATGGGTTGCCGCTGTTTCATTGTTCATGGAATTGCTGGGTTTCTCTACACAGAAATGGCTTACCGCTGGAGGTCTTGGAACAGTATTGCTAACCCTTGCTGGTCGTGAGATATTCACAAACTTCCTCTCAAGTGTGATGATCCATGCGACACGGCCATTTGTCTTGAATGAATGGATCCAAACAAAGATTGAAGGCTATGAAGTTTCTGGTACTGTTGAGCATGTGGGTTGGTGGTCACCAACAATTATAAGAGGTGATGATCGTGAAGCAGTTCACATTCCGAACCACAAGTTCACGGTGAATGTTGTGAGGAATCTCAGTCAGAAGACTCATTGGCGTATCAAAACCCACCTTGCCATCAGTCACTTGGATGTTAATAAGATTAATAATATTGTAGCAGATATGCGCAAAGTCTTGGCAAAAAATCCTCAAGTAGAGCAGCAGAGGTTGCATAGAAGAGTATTTTTGGATAATATTAATCCAGAAAATCAGGCTCTTTTGATTTTGGTATCGTGCTTTGTGAAGACCTCACATTTTGAAGAGTACCTTTGTGTGAAGGAAGCCATTTTGTTGGATCTCCTGAGAGTCATCAGCCATCATCGAGCGCGGCTTGCTACTCCCATCCGTACAGTTCAGAAAATATATAGTGATGCTGACATGGAAAATATCCCATTCTCAGAGACCATTTTCACTCGTGCCGGAGCAGCTACTAACCGTCCGTTCCTACTGCCCCCATACAGAATTAACGGTGACGATAAAACAAAACCTCAAGCTCGTTCAGTACGTACAAATGAAGAACAGGAAGCTAAGGTTGGGAAGGTCACGGAAACATCATCCGACTCCAAGGCAGATGGGAAGGTTGCAGCCACGTCATCTGAATCCAAGGCGGATGGTAAGGTCGCAGCCATGTCTTCCGACTCCAAGGCAGATTCTAAGGTCTCAACATCAACACCCGACTCAAAGGCAGACATTAAGGTTGCAGCAATGTCAGACTCCAAGGCTGACCCTAAGGTCCCAGCAAAGTCCACGTCTGAATCCAAGAGCCTGGATCCAGTGTCCGATGGTTCTGTGCAAAACAACTCCAACAAGAAGCAACCCAAGAAGGCAAGTTCAGCAGATGCACGGCAGAAGAGCATTAAGATTGATAGTGTCCCAACCACATCAACTGCATCCACTCCGCCCAAGTCTCAGCTCGAAGGCCTGGATTCAATGGGACTAAATTCCAAAGACATTACCCTACTGGGAGCAGCTTTTGAGAAGCCTGCAGACACCTTGTCAGAACCTGGCAGTGAAAAAGCAGAAGCAGTCTCCTCACACATGAAGCAAGAAAGTGAGAGGTTGCCAGTAACACCACCTCCAATAGCCAGGCCTGCCTTGGAGGAGAACATTGTTCTTGGTGTTGCTCTAGAGGGCTCGAAGCGGACACTCCCAATTGAGGAAGGGATGACTGCTCCCCCAACTGCAGAAGCAAAGGAGTTGGCGGCTTGCCATAATGCGAGTGTGCCTCCCTCTGCTGCCAAGGATAAGAAAGATGGTCACATTCCAGCAGTTCCTGGTGCAGTAGCAGGTGATCAGCGGGATCAGGAAAGGTGA 2331 0.462 MVAIAGTLQFSHELGICKNHGCTNKFKSVVGRGQLHLCHVALSSHASRRDALSLHLSDCVYWPIRPVPSRCTVFMCRSFLIPGRANEIRILKAAATALTRSYNAFRGSPLVLQLVPAVGIIAFALWGLGPLMRHSRNMFFHRNDSSWKKSSTHYVMTSYVQPLLLWTGATLVCRALDPVVLPTEASQAVKHRLLNFVRSLSTVLALAFSLSSLIQQGQKFFMETNDSNDTRNMGFQFAGKAVYTAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLILVSCFVKTSHFEEYLCVKEAILLDLLRVISHHRARLATPIRTVQKIYSDADMENIPFSETIFTRAGAATNRPFLLPPYRINGDDKTKPQARSVRTNEEQEAKVGKVTETSSDSKADGKVAATSSESKADGKVAAMSSDSKADSKVSTSTPDSKADIKVAAMSDSKADPKVPAKSTSESKSLDPVSDGSVQNNSNKKQPKKASSADARQKSIKIDSVPTTSTASTPPKSQLEGLDSMGLNSKDITLLGAAFEKPADTLSEPGSEKAEAVSSHMKQESERLPVTPPPIARPALEENIVLGVALEGSKRTLPIEEGMTAPPTAEAKELAACHNASVPPSAAKDKKDGHIPAVPGAVAGDQRDQER* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01655 776 Gene3D - 195 297 - -
Eupl03g01655 776 Pfam Mechanosensitive ion channel 240 447 IPR006685 GO:0016020|GO:0055085
Eupl03g01655 776 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Eupl03g01655 776 MobiDBLite consensus disorder prediction 723 776 - -
Eupl03g01655 776 MobiDBLite consensus disorder prediction 666 700 - -
Eupl03g01655 776 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 5 759 IPR045042 -
Eupl03g01655 776 MobiDBLite consensus disorder prediction 487 650 - -
Eupl03g01655 776 MobiDBLite consensus disorder prediction 553 567 - -
Eupl03g01655 776 MobiDBLite consensus disorder prediction 498 526 - -
Eupl03g01655 776 Gene3D - 299 354 IPR023408 -
Eupl03g01655 776 MobiDBLite consensus disorder prediction 583 613 - -
Eupl03g01655 776 MobiDBLite consensus disorder prediction 622 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01655 Eupl-Chr3 44223494 44252526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01655 8 726 Mechanosensitive Ion Channel Family AT1G58200 53.517 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01655 K22047 - nnu:104611915 1045.8