Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01644 ATGACTGAAACGAAGATGAAGAGGACGAAGAAGGGCTCCATCAGCGAAGAAGACGTCTCTTTTCTTCTACAAAGGTATACTGCTACGACAATATTGGCTCTACTTCAGGAAATTGCTCAGTTTCCTGACGTGAAGATTGATTGGAAAACGCTGGTGAAGAAGACTTCAACTGGGATTTCTAGTGCGCGGGAATATCAAATGCTATGGCGGCATTTGGCCTACTGTGACGCATTGGTAGAAAAAGTAGAAGATGGGACTGAACCTTTGGATGATGATAGTGATTTAGAATATGAGTTGGAAGCATTTCCTCCTGTTAGTGGGGAAGCTTCAATGGAGGCAGCAGCATGTGTGAAGGTGCTGCTTGCTTCTGGTTTGCCAAGTGACTCTAGTCCCCTGAGCCGGTCAACTGTAGAGGCTCCATTGACTATAAATATACCTAATGGTCAGGCATCCCGCTCTCCATCAGACAACCCACAGCCAACCTGTACAGAAGGGACAAACATTACTGTTCCAGTTTCTGTCCAGAAACAACCATTGCCTACAGTGACATCTGCAGAAGGATTGCATGGAAACGGATCAGCTAGTGGTGGTTTGCCTGCACGAAGGAAAAGAAAACTGTGGACGGCAGAGGAGGATGTGGAACTAATTGCTGCCGTGCAGAAATGTGGTGAAGGGAACTGGGCAAACATCCTCAAAGGAGACTTCAAGGGTGATAGAACTGCTTCACAATTATCTCAGAGGTGGGCCATCATAAGGAAGCGTCAGGCTAACTTGAATCCCAGTGGAGCTGGCAACTCAACAGGTTCACAACTTTCTGAGGCACAGCTCGCGGCTCGTCGTGCAGTTTCCCTAGCTCTTAATATGCCAATGATGGATAGCTTGTCGGCAGCATGTTCAACTGGTGTGACACATTCAGCCACTCCATCCAGTTCCTCTGCACTACCTGCTGCTTCTGCCGAAGCTTCACCAGCTATGCCCTTGGAAGCCAGGACTAAATCTACAGTTGGCAGCAGTGTTTTGCAAGCACCACATTCGTCTCAGCAAGCCCCCCACCAGAAGCCTGCATCATTTCAGAGAGGAGCATCAAGTCCCACACCAAAATCTCTAGCAACCACGAAAAAAGTGTCATCGGTTCCAGTCAAGTCTTCCGTGAGCCCAAATCCTATGATACAAGCAGCTGCAGTCGCTGCTGGGGCCCGCATTGCGACTCCTTCAACTGCTGCCTCACTGCTCAAAGCTGCGCAGTCCAAGAATGCTGTCCATATCAGACCTGGAGGGGGTTCTCTAATTAAAACATCATTGCCAGGTGTTACAAAACCATTGCCCGCTAACCACTCCACGTCTCGTCCTAATGTACACTATATTCGGACTAGTATGGCATCAGCATCGCAGCCACCACTGCCACCCACCCATTCTTCTGTGTTGCGAAGTGTTTCGCAGCCTAGTGGCAATCAGCAAGCATGTGACAATTCCGTGATACCCGCGGCAGTGACAGGTCAGCTTCCTCCAGTCAGCACAGCCACATCATCAAATTTGTCAGCCCAACAGACGATGTCAGCATCATCCTCGTGTGTCACTTTATGTGGGACTACTGCAGACAAGAACACAAATGCTCTCTCTCCTGTGGGTGTTGTACTCTCATCCAAGGAAGAGGATAAATCTGTCAAAGACATGAAAACAGATGGCTCTGGAAATGTGCCTAAAGACTCTGGCGATCAAGCGGCTTTACCAAACTCAGAGGTGATTGGTGAAAATAAAAACAACAGTGGCTGA 1773 0.4856 MTETKMKRTKKGSISEEDVSFLLQRYTATTILALLQEIAQFPDVKIDWKTLVKKTSTGISSAREYQMLWRHLAYCDALVEKVEDGTEPLDDDSDLEYELEAFPPVSGEASMEAAACVKVLLASGLPSDSSPLSRSTVEAPLTINIPNGQASRSPSDNPQPTCTEGTNITVPVSVQKQPLPTVTSAEGLHGNGSASGGLPARRKRKLWTAEEDVELIAAVQKCGEGNWANILKGDFKGDRTASQLSQRWAIIRKRQANLNPSGAGNSTGSQLSEAQLAARRAVSLALNMPMMDSLSAACSTGVTHSATPSSSSALPAASAEASPAMPLEARTKSTVGSSVLQAPHSSQQAPHQKPASFQRGASSPTPKSLATTKKVSSVPVKSSVSPNPMIQAAAVAAGARIATPSTAASLLKAAQSKNAVHIRPGGGSLIKTSLPGVTKPLPANHSTSRPNVHYIRTSMASASQPPLPPTHSSVLRSVSQPSGNQQACDNSVIPAAVTGQLPPVSTATSSNLSAQQTMSASSSCVTLCGTTADKNTNALSPVGVVLSSKEEDKSVKDMKTDGSGNVPKDSGDQAALPNSEVIGENKNNSG* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01644 590 Gene3D - 199 258 - -
Eupl03g01644 590 ProSiteProfiles Myb-like domain profile. 199 248 IPR001005 -
Eupl03g01644 590 MobiDBLite consensus disorder prediction 300 317 - -
Eupl03g01644 590 SUPERFAMILY Homeodomain-like 201 253 IPR009057 -
Eupl03g01644 590 MobiDBLite consensus disorder prediction 331 384 - -
Eupl03g01644 590 SMART sant 203 254 IPR001005 -
Eupl03g01644 590 MobiDBLite consensus disorder prediction 461 487 - -
Eupl03g01644 590 Pfam Myb-like DNA-binding domain 204 248 IPR001005 -
Eupl03g01644 590 MobiDBLite consensus disorder prediction 545 590 - -
Eupl03g01644 590 CDD SANT_TRF 207 253 - -
Eupl03g01644 590 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 201 256 IPR017930 -
Eupl03g01644 590 MobiDBLite consensus disorder prediction 144 166 - -
Eupl03g01644 590 MobiDBLite consensus disorder prediction 181 201 - -
Eupl03g01644 590 MobiDBLite consensus disorder prediction 549 563 - -
Eupl03g01644 590 MobiDBLite consensus disorder prediction 300 384 - -
Eupl03g01644 590 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01644 Eupl-Chr3 43986769 44011083 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl03g01644 Myb_DNA-binding 3.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01644 - - nnu:104611924 674.47