Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01640 ATGAGAAAGCCAGGGGAAAGATTTTCAGGCATGGAATCAGTATTCGCAGGTTTTGTGCTTGACCCTGCAAAATGTAGTCAGCTAAGCTTGGACGAGAAAAGAGAACTGGTTCACGAAATTGCCCAATGGTCAAAAGATGCACCAGAAATTCTTCGCTCTTGGAGCCGCCGAGAACTACTCGAAATCATATGTGCCGAAATGGGTAAGGAGAGGAAATACACTGGCTTTACAAAATTCAGAATGATAGAGCATCTCCTCAGGTTAGTCTCAGAGAAGTCCACAAAAAACAATAGTGATGATACACTTGCTCTTTCACCAGTCAAGAGTCAGAGTGGCTCCAAAAGGCAAAGGAAGAAAGAGCACCCACTTCGATTAGCCACTGACCCAGATCATGTTCCCCTGGAGAACAGCGGAGGGGAGCAATTCGAAACCCTACTCTGCCAAAATCTTGCATGTAGAGCTACTTTAACTCCGGAGGACGCATTTTGCAAGAGATGTTCTTGCTGTATCTGTTACCAATATGATGATAACAAAGATCCTAGTCTATGGTTGACCTGCGGTTATGATCCTCCTAATCAGAAAGATTCGTGTGGGATGTCATGCCACTTGAAATGTGCTCTTAAGCATGAAAGGGCTGGCATTGTGAAGAATGGGTGCTATACAAAGTTGGATGGCAGTTTCTATTGTGTTTCTTGCCGAAAAATTAACGGACTGATGGGAAGCTGGCGTAAACAATTGTTGGTTGCCAAGGATGCTAGAAGAGTGGATGTCTTGTGTCACCGAGTTTCCCTGAGCCATAAGATTCTCAAAGGAACCGAGCAATACAAAGAACTTCAAAGGATTGTAGATACTGCCATGAAGAAACTCAAAAAAGAAGTGGGACCTGTAGATCGAGTTTCCTCAAAGATGGCACGGGGCATTGTCAACAGGCTCCCTTGCGGTGCTGAGGTTCAGAAGCTGTGCGTTTCTGCGGTAGAAGCCATTGATTCCATACTTTCAGGCTCAAATCCTGATCATACTGATGCAGAAGGCCCACTAAGTTGCTATATCCGATTCGAAGAAGCCTCATCGATCTCTGTAGTCGTTGTATTGGACTATGAAGATAAGCTTTTGGAAGACTTCTTAGGCTGTAGACTCTGGCATCGAAGGTCTACTGTGATGAACTATCCAGAAAAACCCACATACATTGTTCTGAGGCCTGAGAAGAGGTTCTTGATAACAGATCTTGATCCTTCTTCGGAGTACTTCTTCAAGGTTTCTATTTTTGGCAGCACACGGGAACTGGGTGCTTGGGAAGCTAAATGTGTCACACAAGCACCAAGTGGAAGCTCTGTTTCAGCTTTAGATGAAGAACTTGGAAAGCTGGAGCAAGCTTTGATGGTTCAAGCCAATTCACAGAGAGATTCAACCAACTCAAGTGACAGTAAATTAGCCTGTGGCGACAACCACTCAAGACTTCGATTATTGGAGGATATCAGCAAGAATGATGAGTGCGACTTGCTGCCTTGCCCCATGGAGGTTGTACCCTTCATGGGCTCCACATCTGTTCCTCCTGCTACACCGAGCAAATCTGATGGGACCCAAGAGGTACCGGGTTCTGGTGGTAAGAAGCACTCAGCGGAGAGTAACTATGAGTATTGCGTGCGGGTGATCAGATGGTTAGAACGTGAAGGGCACATGGAGAAGGACTTCCGGGTGAAGTTTCTCACTTGGTTCAGCTTGCGAGCTACAATGCAAGAGAAGAGGGTGGTGAGTGCATTCGTGGACACTCTGATTGATGATCCTCCGAGCTTAGCCGGTCAACTTGTCGATACCTTCATGGATGAGATCTGCAATGAGCAGAAGCCAGTTCCTCGAAACGGGTTCTGCACTAGGTTGTGGCATTAA 1887 0.4595 MRKPGERFSGMESVFAGFVLDPAKCSQLSLDEKRELVHEIAQWSKDAPEILRSWSRRELLEIICAEMGKERKYTGFTKFRMIEHLLRLVSEKSTKNNSDDTLALSPVKSQSGSKRQRKKEHPLRLATDPDHVPLENSGGEQFETLLCQNLACRATLTPEDAFCKRCSCCICYQYDDNKDPSLWLTCGYDPPNQKDSCGMSCHLKCALKHERAGIVKNGCYTKLDGSFYCVSCRKINGLMGSWRKQLLVAKDARRVDVLCHRVSLSHKILKGTEQYKELQRIVDTAMKKLKKEVGPVDRVSSKMARGIVNRLPCGAEVQKLCVSAVEAIDSILSGSNPDHTDAEGPLSCYIRFEEASSISVVVVLDYEDKLLEDFLGCRLWHRRSTVMNYPEKPTYIVLRPEKRFLITDLDPSSEYFFKVSIFGSTRELGAWEAKCVTQAPSGSSVSALDEELGKLEQALMVQANSQRDSTNSSDSKLACGDNHSRLRLLEDISKNDECDLLPCPMEVVPFMGSTSVPPATPSKSDGTQEVPGSGGKKHSAESNYEYCVRVIRWLEREGHMEKDFRVKFLTWFSLRATMQEKRVVSAFVDTLIDDPPSLAGQLVDTFMDEICNEQKPVPRNGFCTRLWH* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01640 628 Pfam PHD - plant homeodomain finger protein 147 267 IPR032881 -
Eupl03g01640 628 PANTHER VIN3-LIKE PROTEIN 2-RELATED 18 488 IPR044514 GO:0010048|GO:0040029
Eupl03g01640 628 MobiDBLite consensus disorder prediction 515 529 - -
Eupl03g01640 628 MobiDBLite consensus disorder prediction 512 539 - -
Eupl03g01640 628 MobiDBLite consensus disorder prediction 96 111 - -
Eupl03g01640 628 CDD PHD_VIN3_plant 167 232 - -
Eupl03g01640 628 MobiDBLite consensus disorder prediction 96 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01640 Eupl-Chr3 43891762 43901401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01640 20 628 PHD Gene Family AT5G57380 37.579 8.47e-125 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01640 - - nnu:104595504 1028.47