Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01639 ATGGACGAAGAAATCCGTTTCCCTTCCGACACTGATCTCGACCTTAGCTTCACCAGCTGCGCCTCAAACACCTCCACAGACCGCACCTTCACTTCTTCAAGCGCTCGCAGCAGTCTCACTCTCAGCTTCAACGAGTCCCGCCTTTCCTCCGCTGGAGTACACCGACCCCACCGCAAATCTGACCCACATTGGTCGGCAATCCACGCCGCCACCAACCTCTCCCCGGATGGGACCTTACACCTCCGCCACCTTAAGCTACTTCGCCACCTCGGTAGTGGAAACCTAGGCCGGGTTTTTCTTTGTCGTCTTAAAGACTATGATGACGCCAACTTCGCTCTCAAGGTTGTCGACAGAGATGCGCTCACCAACAAAAAGCTCTCCCACGTACAGATGGAATCTCATGTTCTCTCCACCGTCGATCATCCCTTCCTCCCTACGCTTTACGCACATCTTGAGGTCTCACATTACACGTGTATGCTGATCGATTACTGCCCAGGTGGAGACCTTCACTCCTTACTCCGGAAACAACCGGGAAATCGCTTTCGAGTTGACGCCGTTAGGTTTTTCGCATCGGAGGTTTTGGTGGCTTTGGAGTACTTACACGCTCTTGGAGTGGTTTACCGGGATTTAAAACCAGAAAACGTTTTAATCAGAGAAGACGGGCATATTATGTTGTCGGATTTTGACTTGTGTTTCAAAGCCGATGTGGTCCCCACAGTCGAAAAGCGGCGTAGTTCAAAGGTGGCTCCCACCAAAAACCGGTGTGGCTTATTCGAAGCGGTTTTCCGTCAAGGAGATATACCGAAGGAAGACCTGACGGAGTTTGTGGCTGAGCCGACGGCGGCGTATTCAAGGTCATGCGTGGGAACCCACGAGTACTTGGCGCCGGAGTTAGTTAACGGTAACGGTCACGGTAACGGGGTGGACTGGTGGGCATTTGGGGTGTTCGTTTACGAACTGTTGTACGGGCGGACACCATTTAAGGGTGCAAGTAAAGAAGATACACTGCGCAATATAGCATCGTCGAGGCCGTTTAGGTTCCCAGAGTCTGACGCTGCGGAGGAAGACGGGATGGCGGAGGCAAGGGATTTGATAGAGAAACTGTTGGTGAAGGACCCAAGGAGGAGGCTAGGGTGTGCTAGGGGTGCGACGGATATTAAACGGCACCAATTCTTCGAGGGGATTAAGTGGCCGTTGATAAGGACGTACAGACCTCCGGAGGTTCGTGGGATGTGGAGGAAAACAACGCACGTGAGTCAAGTGAGTGGGGTTTCTCTTTCTTCATCAAAGAGGAGAAGTGGAGCGCATTGGTCGTGGAAGCATTTTGGTAATTTTATTAAAAGGAAAGGTTCCAAGTTAAATACAAAATAA 1371 0.5142 MDEEIRFPSDTDLDLSFTSCASNTSTDRTFTSSSARSSLTLSFNESRLSSAGVHRPHRKSDPHWSAIHAATNLSPDGTLHLRHLKLLRHLGSGNLGRVFLCRLKDYDDANFALKVVDRDALTNKKLSHVQMESHVLSTVDHPFLPTLYAHLEVSHYTCMLIDYCPGGDLHSLLRKQPGNRFRVDAVRFFASEVLVALEYLHALGVVYRDLKPENVLIREDGHIMLSDFDLCFKADVVPTVEKRRSSKVAPTKNRCGLFEAVFRQGDIPKEDLTEFVAEPTAAYSRSCVGTHEYLAPELVNGNGHGNGVDWWAFGVFVYELLYGRTPFKGASKEDTLRNIASSRPFRFPESDAAEEDGMAEARDLIEKLLVKDPRRRLGCARGATDIKRHQFFEGIKWPLIRTYRPPEVRGMWRKTTHVSQVSGVSLSSSKRRSGAHWSWKHFGNFIKRKGSKLNTK* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01639 456 ProSiteProfiles Protein kinase domain profile. 84 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01639 456 Pfam Protein kinase domain 284 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01639 456 Pfam Protein kinase domain 86 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01639 456 SMART serkin_6 84 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01639 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Eupl03g01639 456 Gene3D Transferase(Phosphotransferase) domain 1 284 406 - -
Eupl03g01639 456 Gene3D Phosphorylase Kinase; domain 1 83 167 - -
Eupl03g01639 456 SUPERFAMILY Protein kinase-like (PK-like) 60 425 IPR011009 -
Eupl03g01639 456 CDD STKc_phototropin_like 91 408 - -
Eupl03g01639 456 FunFam Serine/threonine-protein kinase OXI1 168 236 - -
Eupl03g01639 456 FunFam Serine/Threonine Kinase 82 168 - -
Eupl03g01639 456 FunFam Serine/threonine-protein kinase OXI1 282 410 - -
Eupl03g01639 456 PANTHER FLIPPASE KINASE 1-RELATED 31 410 - -
Eupl03g01639 456 Gene3D Transferase(Phosphotransferase) domain 1 168 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01639 Eupl-Chr3 43885701 43887839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01639 1 456 AGC Kinase Gene Family AT3G14370 60.934 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl03g01639 Pkinase 8.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01639 - - psom:113297223 664.84