Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01638 ATGAACCTAACCCACAATTCTATGAACACAATGGATTCTAAGCACTTCTCCTCTTTCCACAACATTCCTCTCTTTGTCATCTTCCTCTTCTTCTTCTTCTTCTTCTTCATCTCTCCTTCTCTTGCAGTTGCAGACACTCCTTCGATTCCTGTCGCGCCAAACGATGTTTGCAATTCGGCCCTTGATCCTAAATATTGCAAATCAGTGCTTCCGCATAATGTGTCGTGGAACCCCAATGATTATAGCCGATTTTCTGCCCTTCAGTCTTTATCAACCGCCAGAAATTTCTTGGCTTTGGTTGATAAGTATCTCACACACCCGTCAACTTTGTCCAAAACTGCCATTCAGGCTCTTAAAGATTGTCAGCTGCTGGCGGGATTAAATATTGATTTCCTGTTAAGGATAGTGGAAACTCTCGATTCTACAAAATCCCCTCATAGCTTGCAGGCCCTCGACGTGCAGACATTGCTTAGTGCCATATTGACTAACCAAGAAACTTGTTTAGATTGCCTTCAAGCGACCACTTCCGCTTGGAACTTTACAAATGGGCTTCACACACGTCTCTCTAATGGAACCAGGCTGTACAGTGTTGCTCTAGCACTGTTCAAGCATGCTTGGGTTCATAAAACGAATGGTACTGAGAAATCGAAACCAGAGAGGATGCTCATGTTCTCCGACATGGAAGGCAGTCGATACGGCCGCATACCCTTGAGACTGTTGAGACAAAGCCGTGATTTCTTCAAGTCAGCAAGTAGAAGAAAAATCCTCGAAGCACCTTTAGGTGTCGCAATAAGTGATATCGTGGTCGTGAACCCGGACGGAAGTGGAAACTTCACCACTGTCAATGATGCTGTAGCTGCAGCGCCAAACAACACCGACATTAGCAATGGCTATTTCCTGATTCAAATTGTTGCTGGGGTTTATGAGGAGTATGTATCCATTGCTAAAAACAAGAACAACTTGATGATGATCGGAGATGGTAAAAACCAAACTGTGATCACAGGCAATCGAAGTGTCGGTGATGGGTGGTCTACATTCAATTCTGCAACCTTTATTGTGGTTGGAAAAGGCTTTGTCGCAACGGATATAACTTTTCGCAACACAGCAGGGCCAAGCAAGGGCCAAGCAGTGGCAGTTCGAAATGGAGCTGATTTGTCCACTTTCTACAATTGTAGCTTTGAAGGATACCAAGATACCTTATACGCCCATTCTCTCAGGCAATTCTACAGGGAATGTGACATATACGGCACAGTCGATTTTATATTCGGTAACGCAGCTGTTGTTTTTCAAAATTGCAATATGTACGCACGACTACCGATTCGGGGTCAATCTAATGAGATTACGGCACAAGGAAGAAGTGATCCGAACCAAAACACGGGCACTTACATACAAAATTGTAGTATTAGAGCAGCTGATGACTTAGCGTCGAGTAACAGTACGGCAAAAACTTTCCTAGGACGACCATGGAAGGAATACTCAAGAACTGTGATCATGCAATCTTTCATTGATAAGTTGATAGATCCTGCTGGGTGGAATGCATGGTCTGGGGACTTCGCCTTAAGCTCTCTATATTATGCAGAATACAACAACACAGGCCCAAGATCAAATACTAGTAACAGAGTTACTTGGACTGGCTACCACATTATAAATGCCACTAATGCAACCACCTTCACTGTCTCCAACTTTATAGGGGGGGATGCATGGTTACCTCCCACCGGGGTGCCCTATTGCGGTGGCTTAATATAA 1746 0.4416 MNLTHNSMNTMDSKHFSSFHNIPLFVIFLFFFFFFFISPSLAVADTPSIPVAPNDVCNSALDPKYCKSVLPHNVSWNPNDYSRFSALQSLSTARNFLALVDKYLTHPSTLSKTAIQALKDCQLLAGLNIDFLLRIVETLDSTKSPHSLQALDVQTLLSAILTNQETCLDCLQATTSAWNFTNGLHTRLSNGTRLYSVALALFKHAWVHKTNGTEKSKPERMLMFSDMEGSRYGRIPLRLLRQSRDFFKSASRRKILEAPLGVAISDIVVVNPDGSGNFTTVNDAVAAAPNNTDISNGYFLIQIVAGVYEEYVSIAKNKNNLMMIGDGKNQTVITGNRSVGDGWSTFNSATFIVVGKGFVATDITFRNTAGPSKGQAVAVRNGADLSTFYNCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNMYARLPIRGQSNEITAQGRSDPNQNTGTYIQNCSIRAADDLASSNSTAKTFLGRPWKEYSRTVIMQSFIDKLIDPAGWNAWSGDFALSSLYYAEYNNTGPRSNTSNRVTWTGYHIINATNATTFTVSNFIGGDAWLPPTGVPYCGGLI* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01638 581 SMART PMEI_2 48 201 IPR006501 GO:0004857
Eupl03g01638 581 Pfam Pectinesterase 268 566 IPR000070 GO:0030599|GO:0042545
Eupl03g01638 581 SUPERFAMILY Pectin lyase-like 262 578 IPR011050 -
Eupl03g01638 581 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 204 IPR035513 -
Eupl03g01638 581 Gene3D - 262 580 IPR012334 -
Eupl03g01638 581 ProSitePatterns Pectinesterase signature 2. 414 423 IPR033131 -
Eupl03g01638 581 NCBIfam pectinesterase inhibitor domain 26 204 IPR006501 GO:0004857
Eupl03g01638 581 FunFam Pectinesterase 262 580 - -
Eupl03g01638 581 Pfam Plant invertase/pectin methylesterase inhibitor 54 201 IPR006501 GO:0004857
Eupl03g01638 581 PANTHER PECTINESTERASE 35 570 - -
Eupl03g01638 581 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 205 IPR035513 -
Eupl03g01638 581 CDD PMEI-like_3 56 206 - -
Eupl03g01638 581 FunFam Pectinesterase 54 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01638 Eupl-Chr3 43880861 43883528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01638 26 581 Carbohydrate Esterase AT2G47550 57.244 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01638 K01051 - nnu:104606202 751.51