Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01635 ATGGCGTCGGCGAGTAACTGGATTTCGTTTTCTCAGTCTCCCTTGGAGATGTTGAGGGCATGCCAATCTCAGATGTTACCGACGAAGTTAATGCCCTACGAGAGCTTTTCTGATTCCTCTCAAAACTATTTCTTCGATAACTTCTACGGAAACGACTACTCGAACATTACAGCTCAAATCCCCGACAGAGAAGAAAGTGAAGACGTCAAAGAAACCAGCGGAACCCACATTGTTGACTTGTCCATTCTCTCTACCATTAACCCACAAATCCAGCAAATAGCGCCGAAGCTTGAAGATTTCTTCGGCGGCCATTCCTCATCCTTTGCTCGATACTCCGACAGCCAAACAGAAACCAAAGAATCCTCGCTAACGAACGTCTACGAACACGGTTCGAGTCAATTTGGCGACCAACAAGATCACAAAACAATCACCGCGTCCACTGGGTTTCAAGTTTTCTCCGCTAACTCGGGTTCGGAAGTCGATGATTCCGTATCAGTTGCCGGAACGCGGTTCTCAAGTCGGAGTTTTCAGGGTCACACGCTTGAATCGAGAAACAACGAGTTAGTGTTCTTGGATGGTCCTCAAGCTTTGTCTCTTGGGGTTATTGAGAGCTCGGAAAAAGCTATCGTTTCCGTTGATTCGGAACCGTCCAAGAAGATAACCACTGATACGTTTGGTCAGAGAACTTCTGTTTACAGAGGGGTTACAAGACACAGATGGACTGGAAGATACGAAGCGCATCTGTGGGATAACAGCTGTAGAAGAGAAGGGCAAACCAGGAAAGGACGTCAAGTGTACTTGGGTGGATATGATAAGGAAGAGAAAGCAGCAAGGGCTTATGATCTCGCTGCTCTAAAATACTGGGCTCTCACTGCCACTACCAACTTCCCGGTTACAAATTATACCAAAGAAATGGAGGAGATGAAGAACATGAGCAAGCAAGAATTCATCGCCTCACTCAGAAGGAAAAGCAGTGGTTTTTCTAGAGGAGCTTCTGTTTACAGAGGGGTAACAAGGCATCACCAACAAGGGCGATGGCAAGCTAGGATAGGTCGAGTTGCTGGGAACAAAGACCTCTACCTTGGCACTTTTGGGACGGAAGAGGAAGCGGCGGAGGCATACGATATAGCGGCTATAAAGTTCAGAGGGGTGAATGCGGTAACTAACTTCGAGATGAGCAGGTACGACGCGGAAGCCATTTCCAACAGCACCCTCCCAATCGGCGGTACGTCCAAGCGCCTCAAACTCTCTCTCGAAGCTGAACTCGTATCACCACCATTAGAGCATGATCAACAACGTCAGAGCAGTAGCAACAATGGGGCTGCGGCTCTATATCGTCAAAACATCTTCCACCACCCTAATTCTGATTCATCCACAGTTATTACTCCCACAGCGGCGCTGTTGCCGCCATTGGATTTTTGTAGCCGAAGCTTCTTGTATGGCCTTACCACCCCTATTAACATCAGCAACCACTTTAACAACAGCAACATTAATCCAACTAACGTCAGCTACCAACCTTGGAATGTGGCATTCTCCTCCGACTGA 1545 0.4764 MASASNWISFSQSPLEMLRACQSQMLPTKLMPYESFSDSSQNYFFDNFYGNDYSNITAQIPDREESEDVKETSGTHIVDLSILSTINPQIQQIAPKLEDFFGGHSSSFARYSDSQTETKESSLTNVYEHGSSQFGDQQDHKTITASTGFQVFSANSGSEVDDSVSVAGTRFSSRSFQGHTLESRNNELVFLDGPQALSLGVIESSEKAIVSVDSEPSKKITTDTFGQRTSVYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWALTATTNFPVTNYTKEMEEMKNMSKQEFIASLRRKSSGFSRGASVYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFGTEEEAAEAYDIAAIKFRGVNAVTNFEMSRYDAEAISNSTLPIGGTSKRLKLSLEAELVSPPLEHDQQRQSSSNNGAAALYRQNIFHHPNSDSSTVITPTAALLPPLDFCSRSFLYGLTTPINISNHFNNSNINPTNVSYQPWNVAFSSD* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01635 514 FunFam AP2-like ethylene-responsive transcription factor ANT 230 299 - -
Eupl03g01635 514 SUPERFAMILY DNA-binding domain 230 298 IPR016177 GO:0003677
Eupl03g01635 514 CDD AP2 332 393 IPR001471 GO:0003700|GO:0006355
Eupl03g01635 514 PRINTS Ethylene responsive element binding protein signature 232 243 IPR001471 GO:0003700|GO:0006355
Eupl03g01635 514 PRINTS Ethylene responsive element binding protein signature 373 393 IPR001471 GO:0003700|GO:0006355
Eupl03g01635 514 Pfam AP2 domain 332 383 IPR001471 GO:0003700|GO:0006355
Eupl03g01635 514 Pfam AP2 domain 230 289 IPR001471 GO:0003700|GO:0006355
Eupl03g01635 514 CDD AP2 230 299 IPR001471 GO:0003700|GO:0006355
Eupl03g01635 514 Gene3D AP2/ERF domain 333 393 IPR036955 GO:0003700|GO:0006355
Eupl03g01635 514 Gene3D AP2/ERF domain 231 299 IPR036955 GO:0003700|GO:0006355
Eupl03g01635 514 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 91 434 - -
Eupl03g01635 514 ProSiteProfiles AP2/ERF domain profile. 333 391 IPR001471 GO:0003700|GO:0006355
Eupl03g01635 514 SMART rav1_2 231 303 IPR001471 GO:0003700|GO:0006355
Eupl03g01635 514 SMART rav1_2 333 397 IPR001471 GO:0003700|GO:0006355
Eupl03g01635 514 FunFam AP2-like ethylene-responsive transcription factor 332 393 - -
Eupl03g01635 514 ProSiteProfiles AP2/ERF domain profile. 231 297 IPR001471 GO:0003700|GO:0006355
Eupl03g01635 514 SUPERFAMILY DNA-binding domain 332 393 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01635 Eupl-Chr3 43826188 43832413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01635 79 420 AP2-EREBP Transcription Factor Family AT5G10510 64.691 1.58e-148 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Eupl03g01635 AP2 6.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01635 K09285 - nnu:104595508 620.157