Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01614 ATGGCTTTACTAACTCTTCTCAAGTTGGTGGGGGAAAGCTTTGATGTTCTTGCCTGGCCACTAATTACTCTGGGGTATCCTCTATATGCTTCAATTCGGGCAATTGAGAGTAACTCCAATGCCGACAACCGGAAATTGCTCACATATTGGGTTCTCTATGCCCTGATAATTCTCTTTGAGTTTACATTTGCTAAGTTCATTGAATGGTTCCCATTCTGGCCTTACATGAGGCTGATAGCCACTTGCTGGTTGTCGGTACCTTACTTCGATGCCACTGTTTATGTTTATGAACACTTTGTTAGGCCCTGCTTGTATGTGAACCCACAGACATTCTGTAACTGGTTCATCACGCAGAAGGAGGACTGCCTTCTCAGATCATCACGTGACTTCCTACTTGTGGCTGAGAGATACATTAAAGAGAATGGATCTGAAGAATTGGAGAAACTCATCAGCGGCAAGGCTAATTGTATGGAGCATAGTCATTTTAGGACAGAGAACAATGCAGTGGCTGCTACAGAGAACATAGAAGCGGCAGCACCAAAGGGGGTCAATTGCACGGAGCCTAATCTTGCTCAGACTGAGAACAAAACAGTCGCTGCTACGGAGAACAAAACAACAGCTTCAGCAGGTAGAGGCTGTGAACTTTCTAGATCACCTGATTCGAAAAAGGCCGAAAAGGAGTGGACTTGTGCTCCCTCTCAGGTGATCACCCACGGTGAGGCCGTTTTGAAGGACCCCCTTCAAGGGAAGAAGCACAATCTTGCTCAGACTGAGAACAAAACAGTTGCTGCCATGGAGAACAAAGCAATGGCTTCAGCAGGTAGAAGCTGTGAACTTTCTGGCTCACTTGATCCAAAAAAATCCCAAAAGGAGTGGACTTGTGCTACCTGTCAGGTGATCACCCTCAGTGAGTCCACTTGGAAGGACCACCTTCAAGGGAAGAAGCACAAGCGTGCTCTGACTGAGAATAAAACAGTCACTGATATGGAGAACAAAGCACTGGCAGCAAAGGCGTCAGCAGGTAGAGGCTCTGAACTTTCTGGACCACTTGATCCGAAAAAAGCCCAAAACGAGTGGGCTTGTGCTCTCTGTCAGGTGATCACCCCCAGTGAGGCTGTTTTGAAGGACCACCTTCAAGGGAAGAAGCACAAGGTCAAGGAAGAGGAGCTCATAGCAAATAAGATGACAGCCAAGAAAAATGATGTCTCTATTTCAAATCCAAAGAATGTTGATCAGCCCACAGTGGCACCAAAGAAGGGTGTATCCACCAATGAACCGAACCTGAAGCATGTCAAGAAACAAGAAGAAAAGAAGGTGGGAGTCAATGGAACTGGAGATCAGTGTCCACAGAAGAACCTGGAGAATACTGAAATTGAGAAGAAACAATCTCCATTATGGTGTGAGGCGTGTGATCTACAGTGCAACAGTACAATTATGTTGAATTCTCATCTTTCTGGGAAGAAGCACTTGGCCCGCTGCAGGGAAATAATAGGTGGTGTGCTTATTTGA 1509 0.4599 MALLTLLKLVGESFDVLAWPLITLGYPLYASIRAIESNSNADNRKLLTYWVLYALIILFEFTFAKFIEWFPFWPYMRLIATCWLSVPYFDATVYVYEHFVRPCLYVNPQTFCNWFITQKEDCLLRSSRDFLLVAERYIKENGSEELEKLISGKANCMEHSHFRTENNAVAATENIEAAAPKGVNCTEPNLAQTENKTVAATENKTTASAGRGCELSRSPDSKKAEKEWTCAPSQVITHGEAVLKDPLQGKKHNLAQTENKTVAAMENKAMASAGRSCELSGSLDPKKSQKEWTCATCQVITLSESTWKDHLQGKKHKRALTENKTVTDMENKALAAKASAGRGSELSGPLDPKKAQNEWACALCQVITPSEAVLKDHLQGKKHKVKEEELIANKMTAKKNDVSISNPKNVDQPTVAPKKGVSTNEPNLKHVKKQEEKKVGVNGTGDQCPQKNLENTEIEKKQSPLWCEACDLQCNSTIMLNSHLSGKKHLARCREIIGGVLI* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01614 502 MobiDBLite consensus disorder prediction 402 425 - -
Eupl03g01614 502 SUPERFAMILY beta-beta-alpha zinc fingers 351 391 IPR036236 -
Eupl03g01614 502 PANTHER OS06G0651300 PROTEIN-RELATED 340 492 - -
Eupl03g01614 502 SMART ZnF_U1_5 289 323 IPR003604 GO:0003676|GO:0008270
Eupl03g01614 502 SMART ZnF_U1_5 462 496 IPR003604 GO:0003676|GO:0008270
Eupl03g01614 502 SMART ZnF_U1_5 356 390 IPR003604 GO:0003676|GO:0008270
Eupl03g01614 502 SMART c2h2final6 292 316 IPR013087 -
Eupl03g01614 502 SMART c2h2final6 465 489 IPR013087 -
Eupl03g01614 502 SMART c2h2final6 359 383 IPR013087 -
Eupl03g01614 502 SUPERFAMILY beta-beta-alpha zinc fingers 448 495 IPR036236 -
Eupl03g01614 502 SUPERFAMILY beta-beta-alpha zinc fingers 285 321 IPR036236 -
Eupl03g01614 502 MobiDBLite consensus disorder prediction 402 421 - -
Eupl03g01614 502 Pfam TB2/DP1, HVA22 family 27 103 IPR004345 -
Eupl03g01614 502 Gene3D Classic Zinc Finger 283 329 - -
Eupl03g01614 502 Pfam Zinc-finger of C2H2 type 292 316 - -
Eupl03g01614 502 Pfam Zinc-finger of C2H2 type 359 383 - -
Eupl03g01614 502 Pfam Zinc-finger of C2H2 type 466 489 - -
Eupl03g01614 502 Gene3D Classic Zinc Finger 446 495 - -
Eupl03g01614 502 Gene3D Classic Zinc Finger 344 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01614 Eupl-Chr3 43073955 43076815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01614 294 502 C2H2 Transcription Factor Family AT5G61190 25.410 5.70e-10 60.1