Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01609 ATGAATTATAGCATCTTGCCTTTGTTGCAGGTCAATTGGACGGAGCCTAATCTTCCTCAGACTGAGAACAAAACAGTAACGGCTTCAGCAGGTGTAGGCTGTGAACTTTTTGGATCACTCGATCTGAAAGAAGTCCAACAAGAGTGGACTTGTTCTCTCTGTCAGGTGAACATCACCAGTAAGGCCAAGTGGAGGAGCCATAAATACGGGATGAAGCACAATGCCAAGTTAGAGGAGCTCAGAGCGAATGAGATGGCAGCCAAGAAACTATCTGCATTATGGTGTAATCTGTGTAATGTACGGTGCGACACTATATTTGTGATGAATGGTCATCTTGCTGGGAAGAAGCACTTGGCTGCGCTGCAGGATGGAGTAGGCCGTGAGCTCGTTTGA 393 0.4656 MNYSILPLLQVNWTEPNLPQTENKTVTASAGVGCELFGSLDLKEVQQEWTCSLCQVNITSKAKWRSHKYGMKHNAKLEELRANEMAAKKLSALWCNLCNVRCDTIFVMNGHLAGKKHLAALQDGVGRELV* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01609 130 SUPERFAMILY beta-beta-alpha zinc fingers 42 82 IPR036236 -
Eupl03g01609 130 Gene3D Classic Zinc Finger 38 79 - -
Eupl03g01609 130 Gene3D Classic Zinc Finger 80 123 - -
Eupl03g01609 130 Pfam Zinc-finger of C2H2 type 49 73 - -
Eupl03g01609 130 Pfam Zinc-finger of C2H2 type 93 117 - -
Eupl03g01609 130 PANTHER OS06G0651300 PROTEIN-RELATED 42 89 - -
Eupl03g01609 130 SUPERFAMILY beta-beta-alpha zinc fingers 87 122 IPR036236 -
Eupl03g01609 130 SMART ZnF_U1_5 90 124 IPR003604 GO:0003676|GO:0008270
Eupl03g01609 130 SMART ZnF_U1_5 46 80 IPR003604 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01609 Eupl-Chr3 42998582 42998974 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01609 51 117 C2H2 Transcription Factor Family AT5G61190 28.421 1.50e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01609 - - aew:130754272 71.6329