Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01605 ATGCCTGTCACTACCCGTCAACGCATCATGTTCAAGTTCCAAGAGCTCATCCGTAGAGACATTGATAAGCTCGCCATGAATATAACTATCGAACAGGGGAAGACATTGAAGGACGCCCATGGTGATGTGTTCCGTGGTTTAGAGGTGGTAGAACATGCTTGTGGAATGGCAACTGTGCAAATGGGAGAGTTTGTTTCCAATGTGTCACATGGAATTGATACATTCAGTATCAGGGAACCGCTCGGGGTTTGTGCTGGGATATGTCCCTTCAACTTTCCAGCAATGATTCCCTTATGGATGTTCCCAATGGCAGTCACATGTGGCAATACATTTGTTCTGAAGCCATCAGAGAAAGATCCAGACTGCTTTGTTTTCCAATTTGGGCAGGAAATTGTTAATAATATTTGTGATGACAACGACATTAAGGCCATATCATTTGTGGGTTCAAATATAGCTGGCATGCACATATATGCAAGAGCAACAGCTAAGGGGAAACGTGTGCAGTCCAATATGGGAGCCAAAAATCATGCAATTATCATGCCTGATGCAAGCATGGATGCTACTTTGAATTCCCTAGTTGCCGCTGGTTTTGGTGCTGCAGGGCAAAGGTGCATGGCACTCAGCACAGCTGTTTTTGTCGGGGACTCAAAGCCATGGGAGGAGGGGCTTTTGGAGCGTGCCAAAGCACTTAAAGTAAATGCAGGAACTGAACCTGGGGCAGACCTTGGTCCAGTGATTAGTAAACAGGCGAAGGATCGAATATGCAGATTGATCCAAAACGGTGTTGAAAATGGTGCTAGACTTGTGCATGATGGGAGAAATATTGTGGTCCAGGGCTACGAGGACGGCAACTTTGTTGGTCCTACCATCTTATCTGATGTGACAAGCAACATGGAGTGTTACGAGGAGGAAATCTTTGGTCCAGTTCTCCTCTGCATGCGGGCTGACAGCCTAGAAGAGGCTATAGACATTGTTAACAGAAACAAATACGGTAATGGAGCATCTATATTTACCACATCTGGTGTAGCTGCAAGAAAATTCCAAAATGAGATAGAAGCAGGCCAGGTTGGCATTAATGTTCCCATTCCAGTTCCATTGCCCTTTTTCTCATTCACTGGATCCAAGGCATCTTTCGCAGGAGATCTCAACTTCTATGGCAAGGCAGGTGTGCAGTTCTACACCCAAATCAAAACGGTGACTCAACAATGGAAGGATTTGCCGAGCCAGGGTGTATCACTGGCTATGCCCACGTCTCAGAAAACATAA 1266 0.4566 MPVTTRQRIMFKFQELIRRDIDKLAMNITIEQGKTLKDAHGDVFRGLEVVEHACGMATVQMGEFVSNVSHGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPMAVTCGNTFVLKPSEKDPDCFVFQFGQEIVNNICDDNDIKAISFVGSNIAGMHIYARATAKGKRVQSNMGAKNHAIIMPDASMDATLNSLVAAGFGAAGQRCMALSTAVFVGDSKPWEEGLLERAKALKVNAGTEPGADLGPVISKQAKDRICRLIQNGVENGARLVHDGRNIVVQGYEDGNFVGPTILSDVTSNMECYEEEIFGPVLLCMRADSLEEAIDIVNRNKYGNGASIFTTSGVAARKFQNEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVQFYTQIKTVTQQWKDLPSQGVSLAMPTSQKT* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01605 421 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 418 IPR010061 GO:0004491
Eupl03g01605 421 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 120 IPR016162 GO:0016491
Eupl03g01605 421 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 172 372 - -
Eupl03g01605 421 SUPERFAMILY ALDH-like 1 405 IPR016161 GO:0016491
Eupl03g01605 421 Pfam Aldehyde dehydrogenase family 1 121 IPR015590 GO:0016491
Eupl03g01605 421 Pfam Aldehyde dehydrogenase family 124 399 IPR015590 GO:0016491
Eupl03g01605 421 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 127 380 IPR016162 GO:0016491
Eupl03g01605 421 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 172 372 IPR016163 GO:0016620
Eupl03g01605 421 CDD ALDH_F6_MMSDH 1 403 IPR010061 GO:0004491
Eupl03g01605 421 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 197 208 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01605 Eupl-Chr3 42972903 42981260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01605 2 387 Aldehyde Dehydrogenase Gene Family AT2G14170 75.000 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01605 K00140 - msin:131218717 747.273