Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl03g01600 | ATGGCTTCTCGTTTCTGGACACAGGGTGACAGTGACACTGAGGAGGAAGAGGAGGAGGTGGAGAATGATTACGAAGATGGAGCTGATAATGGTGGTGGAGAGGCTGCCGGAGCGGCCGCTGGGAGCAGATACCTGCAGGGGAATGCGAGCGATAGTGATGACTCTGAAGGTCAGAGGCGTGTTGTCCGATCTGCCAAAGACAAGCGCTTTGAGGAGATGTCGGCCACCGTAGACCAGATGAAGAACGCCATGAAGATCAATGACTGGGTGAGCCTCCAGGAGAACTTCGACAAGATTAATAAGCAGCTTGATAAGGTCATCCGGGTCACGGAATCCGAAAAGGTCCCGACCCTCTACATCAAAGCTCTTGTAATGTTGGAGGACTTCTTGAGTGAGGCTCTGGCCAATAAGGACGCCAAGAAGAAGATGAGTAGTAGCAATGCCAAGGCCTTGAATTCCATGAAACAAAAACTTAAGAAGAACAACAAACAATATGAGGATTTGATCAATAAGTTCAGGGAGAGTCACGAAAGCGAGGATGAAGGGCAAGGGGATGAGCAGACAGAGGAGGAGGAGGATTCGGGTTCAGAGTTCGAGGAGGACCCGTCAAAAATGGCAATCATGTCTGAGTCGGAAAATGGTGAGGATGGAGATGCGGAGGACGGGGATAACCAAGCCGAGGGCGGTGGGGGTTGGGAGAAGATGATGAGCAGGAAAGATAAGCTCATGGACAAACAATTCATGAGGGACCCGAGTGAGATCACGTGGGATACAGTTGATAAGAAGCTCAAGGAGATTGTAGCTGCAAGGGGGCGGAAGGGAACTGGAAGGGTCGAGCAGGTCGAACAGCTCACTTTTTTAACAAAAGTTGCCAAGACCCCTGCCCAGAAGCTTGAGATCCTCTTCAATGTCGTATCTGCTCAGTTTGATGTCAACCCAAGTCTCAGCGGGCACATGCCTGTAAATGTGTGGAAGAAGTGCGTGGTAAACATGCTTATCATTCTCGACATCCTTGAGCAGTATCCAAACATTGTGGTGGATGACTCGGTGGAGCCTGAAGAGAACGAGACCCAGAAGGGAGTGGATTATAAGGGGACGATTCGGGTTTGGGGGAACTTGGTTGCCTTTCTTGAGCGGATGGATGTTGAGTTCTTCAAAAGCTTGCAATGCATTGATCCTCACACTCGGGAGTACGTGGAGAGGCTCAGGGATGAGCCTATGTTCTTTGTTCTTGCTCAAAATGTTCAGGATTACTTAGAACGGATTGGGGATTTTAAGGCAGCTGCAAAGGTTGCATTGAGACGGGTCGAGCTTATTTATTATAAGCCTCAAGAGGTTTATGATGCAATGAGAAAATTGGCTGAGCAGACGGAGGGTGGAGAGAATGAGGAAACTGTGGCAGATGAAGAGCCCCAAGTGGTCGAGGAAACTAGGGGTCCACCAGCTTTTGTTGTTACTCCCGAGCTTGTGCCTCGAAGACCCACTTTTCCAGAGAACTGTAGGACATTGATGGATGAGCTTGTCTCTCTTATTTACAAGTATGGGGATGAGCGGACTAAAGCTCGTGCTATGCTCTGTGATATATATCACCATGCTATCATGGACAAGTTCTCAAATTCACGAGATTTATTGCTGATGAGTCACTTGCAGGATGGGGTTCAGCACATGGACATTTCAACACAAATCCTTTTCAACAGGGCTATGGCCCAACTTGGTCTATGTGCATTTAGAGTTGGACTTATTACAGAAGCACACGGTTGCCTTTCTGAGCTATATGCGGGTGGAAGGGTGAAGGAGTTACTTGCACAAGGTGTCTCACAGAGCCGTTATCATGAGAAGACTCCAGAGCAGGAAAAGCTGGAACGAAGACGGCAGATGCCTTACCACATGCACATAAATCTTGAGCTCCTGGAGGCTGTCCATTTGATATGTGCCATGCTCCTGGAGGTTCCCAACATGGCGGCCAACACTCATGACACCAAACGCAAAGTCATAAGCAAGAACTTCCGTAGGCTGCTCGAGATGAGCGAGAGGCAGACCTTCACGGGCCCCCCTGAAAATGTCCGGGACCACATTATGGCTGCCACTAGGGCTCTTGGCAAGGGAGATTTCCAGAAGGCCTTTGATGTCATCAAGTCCCTTGATGCCTGGAAGCTCCTCAGGAACCGAGAGAATGTTCTTGAGATGCTCAAGACCAAGATCGAGGAAGAAGCTCTGAGGACCTACCTGTTCACGTACTCCTCATGTTATGATTCCCTGAGCTTGGACCAGCTCACCACAATGTTTGACCTCTCGGAAGCCCAAGCACACAGCATCGTGAGTAAGATGATGATTATGGAGGAGCTCCATGCAAGCTGGGATCAGCCTACCCGGTGCATTGTCTTCCACAACGTGGAGCCCACGAGGTTACAGGCTCTCGCATTCCAGTTGACAGAGAAGCTTTCAATCCTTGCAGAAAGCAACGAGAAGGCATTTGAGGCGAGGACAGGTGGAGGGCTGGATGGCTTGCCCCAGAGGCGTAGGGAGGGCCAGGACTATGCTGGGGTTACTGCGGGCAAGTGGCAAGAGAACCTCTCTCAGGGAAGGCAAGTTGGTTATGGCGGGCGTTCAGGATATAGTGGTGGTGGGAGACTATCAGCTTCAGGAGGAGGATATTCTAGAGATCGAGCGGGGCAGTTGCGAGGAACTGGAGGGTATTCAGCAGGTTACCAGAGCACCCGTTATCAAGATGCATACAGCGGGGTTGGGAGGACTCCCTATCAGACAGGTTCAGCGGTGAGGGGATCGCAGATGGATGCTTCAGCTCGCATGGTAAGTCTGAACAGGGCGGGTCGCGTTCAGTAG | 2844 | 0.5049 | MASRFWTQGDSDTEEEEEEVENDYEDGADNGGGEAAGAAAGSRYLQGNASDSDDSEGQRRVVRSAKDKRFEEMSATVDQMKNAMKINDWVSLQENFDKINKQLDKVIRVTESEKVPTLYIKALVMLEDFLSEALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLINKFRESHESEDEGQGDEQTEEEEDSGSEFEEDPSKMAIMSESENGEDGDAEDGDNQAEGGGGWEKMMSRKDKLMDKQFMRDPSEITWDTVDKKLKEIVAARGRKGTGRVEQVEQLTFLTKVAKTPAQKLEILFNVVSAQFDVNPSLSGHMPVNVWKKCVVNMLIILDILEQYPNIVVDDSVEPEENETQKGVDYKGTIRVWGNLVAFLERMDVEFFKSLQCIDPHTREYVERLRDEPMFFVLAQNVQDYLERIGDFKAAAKVALRRVELIYYKPQEVYDAMRKLAEQTEGGENEETVADEEPQVVEETRGPPAFVVTPELVPRRPTFPENCRTLMDELVSLIYKYGDERTKARAMLCDIYHHAIMDKFSNSRDLLLMSHLQDGVQHMDISTQILFNRAMAQLGLCAFRVGLITEAHGCLSELYAGGRVKELLAQGVSQSRYHEKTPEQEKLERRRQMPYHMHINLELLEAVHLICAMLLEVPNMAANTHDTKRKVISKNFRRLLEMSERQTFTGPPENVRDHIMAATRALGKGDFQKAFDVIKSLDAWKLLRNRENVLEMLKTKIEEEALRTYLFTYSSCYDSLSLDQLTTMFDLSEAQAHSIVSKMMIMEELHASWDQPTRCIVFHNVEPTRLQALAFQLTEKLSILAESNEKAFEARTGGGLDGLPQRRREGQDYAGVTAGKWQENLSQGRQVGYGGRSGYSGGGRLSASGGGYSRDRAGQLRGTGGYSAGYQSTRYQDAYSGVGRTPYQTGSAVRGSQMDASARMVSLNRAGRVQ* | 948 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl03g01600 | 947 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 729 | 817 | IPR000717 | - | |
Eupl03g01600 | 947 | Pfam | Eukaryotic translation initiation factor 3 subunit 8 N-terminus | 49 | 659 | IPR008905 | GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Eupl03g01600 | 947 | FunFam | Eukaryotic translation initiation factor 3 subunit C | 726 | 804 | - | - | |
Eupl03g01600 | 947 | Coils | Coil | 148 | 175 | - | - | |
Eupl03g01600 | 947 | PANTHER | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED | 1 | 940 | IPR027516 | GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Eupl03g01600 | 947 | MobiDBLite | consensus disorder prediction | 53 | 71 | - | - | |
Eupl03g01600 | 947 | MobiDBLite | consensus disorder prediction | 11 | 28 | - | - | |
Eupl03g01600 | 947 | MobiDBLite | consensus disorder prediction | 1 | 71 | - | - | |
Eupl03g01600 | 947 | Hamap | Eukaryotic translation initiation factor 3 subunit C [EIF3C]. | 2 | 887 | IPR027516 | GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Eupl03g01600 | 947 | MobiDBLite | consensus disorder prediction | 181 | 198 | - | - | |
Eupl03g01600 | 947 | MobiDBLite | consensus disorder prediction | 137 | 159 | - | - | |
Eupl03g01600 | 947 | Gene3D | - | 731 | 802 | IPR036388 | - | |
Eupl03g01600 | 947 | Pfam | PCI domain | 668 | 797 | IPR000717 | - | |
Eupl03g01600 | 947 | ProSiteProfiles | PCI domain profile. | 628 | 800 | IPR000717 | - | |
Eupl03g01600 | 947 | MobiDBLite | consensus disorder prediction | 174 | 234 | - | - | |
Eupl03g01600 | 947 | SUPERFAMILY | "Winged helix" DNA-binding domain | 726 | 800 | IPR036390 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl03g01600 | Eupl-Chr3 | 42933829 | 42941474 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl03g01600 | 1 | 946 | Eukaryotic Initiation Factors Gene Family | AT3G56150 | 67.576 | 0.0 | 1196 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl03g01600 | K03252 | - | msin:131231449 | 1508.43 |