Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01572 ATGAAGGGAAACTATATTCACCATATCCAAGAAGAAGAAGAAGCAAACAATACAAACGACATGTTTGCAAAGCTCCACTACCACCACCAACACCACCACCACCAGCTGAGTCTAGAACGCCAGGCTTCCGAAGAAGATGAGAGTCGGAGCAGCGGAGGTGGCGGAGGTGTGGGAACAACGACCAACAAAATCAAGAAAGGAGAACAAGGCAACAGCGGTGGCGGAGGAGACGGGGCCACCATAGAAGTGGTGAGGCGACCAAGAGGCCGACCCCCAGGTTCCAAAAACAAGCCCAAGCCCCCCGTCTTCATAACGCGTGACACTGAGTGCGCAATGCGCCCACACGTCCTCCAAGTCCCCGGTGGTCTCGACATCATCGATGCCATCGATCGCTTTGCTCGTCGACGCAATATCGGTCTCTGCGTCCTCACCGGCTCAGGCACTGTCGCTAATGTCTCCCTACGCCAGCCTTCCACCACCCCAGGAGCTACAGTGACCTTCCATGGCCGCTTCGACATTCTCTCCATCTCGGCAACCTTTCTTCCTCCATCATCATCATCATCATCATCTCTCCCATCTCCAGCCACCAACTCGTTTACAATCTCGCTTGCAGGCCCACAAGGTCAGATCGTCGGTGGGTCTGTTGTTGGTTCTCTACTCGCCGCTGGGACTGTTTCCATTGTTGCCGCATCGTTCACTAGTCCATCATATCACCGTTTGCCCATCGAAGAAGAAGATCCCAATTCATTATCTGGTAATAATAACCCCGGCAACCACCCTCCTCCTTCGGCACCTGTTTCGGGTGAAGAAAACCACCCACCTACGGCGGAGTCATGCGGTATGTCCATCTACAGCTGCCACCTCCCTTCGGATGTCATTTGGGCTCCCACCGCCAGACAAGCACCACCACCACCGTTCTGA 921 0.5451 MKGNYIHHIQEEEEANNTNDMFAKLHYHHQHHHHQLSLERQASEEDESRSSGGGGGVGTTTNKIKKGEQGNSGGGGDGATIEVVRRPRGRPPGSKNKPKPPVFITRDTECAMRPHVLQVPGGLDIIDAIDRFARRRNIGLCVLTGSGTVANVSLRQPSTTPGATVTFHGRFDILSISATFLPPSSSSSSSLPSPATNSFTISLAGPQGQIVGGSVVGSLLAAGTVSIVAASFTSPSYHRLPIEEEDPNSLSGNNNPGNHPPPSAPVSGEENHPPTAESCGMSIYSCHLPSDVIWAPTARQAPPPPF* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01572 306 MobiDBLite consensus disorder prediction 53 68 - -
Eupl03g01572 306 Gene3D - 112 255 - -
Eupl03g01572 306 SUPERFAMILY AF0104/ALDC/Ptd012-like 111 250 - -
Eupl03g01572 306 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 41 269 IPR014476 GO:0003680
Eupl03g01572 306 MobiDBLite consensus disorder prediction 28 103 - -
Eupl03g01572 306 CDD DUF296 113 232 IPR005175 -
Eupl03g01572 306 FunFam AT-hook motif nuclear-localized protein 113 251 - -
Eupl03g01572 306 Pfam Plants and Prokaryotes Conserved (PCC) domain 113 233 IPR005175 -
Eupl03g01572 306 PIRSF ESCAROLA 10 295 IPR014476 GO:0003680
Eupl03g01572 306 ProSiteProfiles PPC domain profile profile. 109 253 IPR005175 -
Eupl03g01572 306 MobiDBLite consensus disorder prediction 239 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01572 Eupl-Chr3 42385379 42386309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01572 77 304 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 61.803 1.21e-92 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01572 - - nnu:104611900 310.071