Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01564 ATGGCGGAAGAAGATTACACAGAGGCTCTTCGACCTTCGTTTCCACTCGGACGAGTCAAGAAAATTATGAAGCTGGATCAAGAGATTAAGAAGGTGAACTCAGAAGCCCTCTTCCTCGTCTCCCTCTCTACCGATCTCTTTCTTCGATTCCTAGCCGAGAAATCCACTGAAATTGTCGTAGAGAAGAAGCGAAGGACTGTCAAGCTTGAACACTTGAGAATCGCTGCAAAGAGGCACCAACCCACAAACGATTTCCTACTCGATTCACTGCCTATGCCTTCCCAGAAGTCGATTCGTCCGTCGACGGTCCAGGATCGATCTGGCCCTGCTGTCGAGAAACCGCTTCCGGTGGGTGCTCGCCGTATCGATGATTTCTTTAGCAAATCTGCAAATGAGACGAAATGA 405 0.4889 MAEEDYTEALRPSFPLGRVKKIMKLDQEIKKVNSEALFLVSLSTDLFLRFLAEKSTEIVVEKKRRTVKLEHLRIAAKRHQPTNDFLLDSLPMPSQKSIRPSTVQDRSGPAVEKPLPVGARRIDDFFSKSANETK* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01564 134 Gene3D Histone, subunit A 1 92 IPR009072 GO:0046982
Eupl03g01564 134 MobiDBLite consensus disorder prediction 85 114 - -
Eupl03g01564 134 MobiDBLite consensus disorder prediction 87 104 - -
Eupl03g01564 134 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 75 IPR003958 -
Eupl03g01564 134 SUPERFAMILY Histone-fold 11 91 IPR009072 GO:0046982
Eupl03g01564 134 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 12 95 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01564 1 133 CCAAT-HAP5 Transcription Factor Family AT5G43250 59.398 3.68e-51 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Eupl03g01564 CBFD_NFYB_HMF 3.7e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01564 - - nnu:104599973 193.356