Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01549 ATGTCCGACTCCATTTTCCTAGCGAGAGACTTCCCTGAAAACCCTAACTCTATCCCTAATTACACTTATCTAATGGATCATCTGGACCTACCGGACTTCAAAGTTTCCGATTATCTGTTACTCGAAGATGGGTCGGAGGAAGATTCCACATCTACACATATCGGATGTAACTCGCCGAATCCAATTTCGCCAGAAAAAATCGAAGATTTCTTCGGATTCAGCGATGACACTCCTAGAAGTAGCAACATAAAATGTAAAAGTAAGGTGAAGAAAATGAAGATGGATTTGGGGTTTCGGATTGCGTTTAGAACGAAATCGGAGCTCGAAATCATGGATGATGGATTCAAATGGAGGAAGTATGGGAAGAAGACAGTGAAGGACAGCCCAAATCCTAGGAATTACTATAGGTGCTCAAGTGGAGGGTGCGATGTGAAGAAGAGAGTGGAAAGAGACCGGGAAGACTCAAGCTACGTGATAACGACGTATGAGGGTGTGCACAACCACGAAAGCCCCTGCGTTGTCTACTACAACCAAATGCCTTTAATGGTCCCAAATGGATGGACTTTGCAAGCTTCTCACTCAACTTCCTCGTGA 594 0.4428 MSDSIFLARDFPENPNSIPNYTYLMDHLDLPDFKVSDYLLLEDGSEEDSTSTHIGCNSPNPISPEKIEDFFGFSDDTPRSSNIKCKSKVKKMKMDLGFRIAFRTKSELEIMDDGFKWRKYGKKTVKDSPNPRNYYRCSSGGCDVKKRVERDREDSSYVITTYEGVHNHESPCVVYYNQMPLMVPNGWTLQASHSTSS* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01549 197 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 60 172 IPR044810 GO:0003700
Eupl03g01549 197 SMART WRKY_cls 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl03g01549 197 Pfam WRKY DNA -binding domain 112 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl03g01549 197 SUPERFAMILY WRKY DNA-binding domain 103 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl03g01549 197 Gene3D WRKY domain 98 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl03g01549 197 ProSiteProfiles WRKY domain profile. 106 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl03g01549 197 FunFam WRKY transcription factor 57 97 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01549 Eupl-Chr3 42108354 42110264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01549 10 181 WRKY Transcription Factor Family AT5G64810 44.565 2.34e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl03g01549 WRKY 1.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01549 - - nnu:104599987 293.893