Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01545 ATGGAGTTCAACGATGGATTTCTGTCAGAAGAGCATCTGGAGCAGTTCCGATCTGCTTCAGAGAGTATGGATCCAATATCTGTATCCCCATTCGAGATTACTCCATCCCCTAAGTCTTCGAAATCCCTGAAAACTCATCATGGAAAGCATGGCTCGAGCAAGGGGAGCCCAGTCAAGCATGATAGGCATACACATTGTGGAAGAAATGGACGTCCTAGTAAAGGTGGCTCTGGCGGAAAAGGCACCTGGGGAGGGCTACTTGATACAGGAGATGGTTATCTTCTGGATCCGAATGATCCAAACTACGACAGCAATGAGGAAAATATCCAGTTAAATCTGGTAGATGCTTCTGAGGAGTACAAAAAGAAGACTAAGATAATAGTGGAGGAATACTTTGTTACAGATGATGTTGTCTCGACTGCAAATGAATTAAGAGAACTTGACATGCCACGCTATAACTACTATTTTGTTAAGAAGCTCCTCTCTTTGGCTATGGATAGGCATGACAAAGAGAAAGAAATGGCTGCTGTTTTATTATCTACACTTTATGCCGACGTGATTGAACCCCCACAAGTTTACAAAGGCTTCAGCAAATTGGTTGAATCAGCAGATGACTTGATTGTGGATATACCAGATACAGTAGATGTTCTTGCTTTGTTCATAGCTCGGGCTGTAGTTGATGACATACTTCCTCCAGCATTTTTGACCAAACAAATCGTCTCATTGTCTAAGGACTCGAAAGGGGTAGAAGTTATAACAAGAGCCGAGAAGGTCTACTTATCAGCTCCATTCCATGTGGAGATCGTTGAACGCAGGTGGGGGGGAAGCAAGAACAAAACAGTTGATGACGTGAAGGCTAAGATAAACAATCTGCTGATAGAGTATATAGTAAGTGGCGACAAGATGGAGGCTTGCAGGTGCATCAAGGATTTGAAAGTCCCTTTCTTTCACCATGAGATAGTCAAGCGCGCCCTAATAATGGCAATGGAAAGGCAGGCAGCTGAAGGCCGGCTTCTAGATTTATTGAAGGAAGTTGCCGAGGAAGGTGTGATTAATTCGAGTCAAATAACAAAGGGATTTGGCCGGCTAATTGACACTGTTGATGACTTATCACTTGATATCCTGAGTGCAAGGGAGCTCTTGCAGTCCTTGATCTCCAAGGCAGCATCAGAGGGCTGGTTATGTGCTTCATCTCTGAAGTCTTTTTCTTTCCAACAAGAGAAGCAATTAGAGGATAATGCTGCCAGACTTTTCAAGATCAAGGTTCAATCAATTATTCTGGAGTATTTCTTGACAGGTGATATATTGGAGGTGATTAGTAGTCTAGAATCGGAGAACAGTAGTTCGTCTTCTGAATTAAATGCCATTTTTGTGAAGAAGCTGATAACCATAGCAATGGATCGGAAGAATAGGGAGAAAGAAATGGCTTCTGTCTTGCTGCCATCTTTGTGTTTTCCAGTAGATGATGTCGTAAATGGTTTCATAATGTTGGTTGAGTCTGCAGACGACACTGCTTTGGATATTCCAGCCGTTGTCGAGGATCTTGCAATGTTCTTAGCAAGAGCTGTGGTGGATGAAGTCCTTGCCCCACAACATTTGGAGGATATTGGAAGTCAGTGTGTGGGGAGTATGGGGCAAGACTCAATTGGCAGCAAAGTGCTCCAAATGGCACGGTCGTTGCTACGGGCTCGCCTTTCTGGTGAGCGGATTTTAAGGTGTTGGGGTGGTGGGGGAAGCAGCAAGCCTGGATGGGCTATTGAGGATATCAAAGATAAGATTGAAAAGCTGTTAGAGGAGTACGATTCTGGTGGGGATGTGCGGGAAGCTTTTCGCTGCATAAAGGAGCTAGGCATGCCTTTTTTTCACCACGAGGTTGTCAAGAAGGCATTTGTGGCAGTTATGGAGAAGAAGAATGAAAGGTTGTGGAGTTTACTAGGGGAGTGTTTTTCTGTGGGTCTCATCACCTCAAATCAGATGATGAAAGGTTTCGGAAGAGTGGCAGAATCTCTTGATGACTTGGCTTTGGATGTGCCAGATGCTGAACAACAGTATGCTCGATATGTTGAATGTGCGAAGGTTGCAGGATGGTTGGATTCTTCGTTCCCTGCCAGCAGACCGGTACATGTAGTCTTTAATGGCTCATGTTCATGA 2151 0.4426 MEFNDGFLSEEHLEQFRSASESMDPISVSPFEITPSPKSSKSLKTHHGKHGSSKGSPVKHDRHTHCGRNGRPSKGGSGGKGTWGGLLDTGDGYLLDPNDPNYDSNEENIQLNLVDASEEYKKKTKIIVEEYFVTDDVVSTANELRELDMPRYNYYFVKKLLSLAMDRHDKEKEMAAVLLSTLYADVIEPPQVYKGFSKLVESADDLIVDIPDTVDVLALFIARAVVDDILPPAFLTKQIVSLSKDSKGVEVITRAEKVYLSAPFHVEIVERRWGGSKNKTVDDVKAKINNLLIEYIVSGDKMEACRCIKDLKVPFFHHEIVKRALIMAMERQAAEGRLLDLLKEVAEEGVINSSQITKGFGRLIDTVDDLSLDILSARELLQSLISKAASEGWLCASSLKSFSFQQEKQLEDNAARLFKIKVQSIILEYFLTGDILEVISSLESENSSSSSELNAIFVKKLITIAMDRKNREKEMASVLLPSLCFPVDDVVNGFIMLVESADDTALDIPAVVEDLAMFLARAVVDEVLAPQHLEDIGSQCVGSMGQDSIGSKVLQMARSLLRARLSGERILRCWGGGGSSKPGWAIEDIKDKIEKLLEEYDSGGDVREAFRCIKELGMPFFHHEVVKKAFVAVMEKKNERLWSLLGECFSVGLITSNQMMKGFGRVAESLDDLALDVPDAEQQYARYVECAKVAGWLDSSFPASRPVHVVFNGSCS* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01545 716 Gene3D - 113 261 - -
Eupl03g01545 716 Gene3D - 414 564 - -
Eupl03g01545 716 SUPERFAMILY ARM repeat 418 578 IPR016024 -
Eupl03g01545 716 ProSiteProfiles MI domain profile. 283 404 IPR003891 -
Eupl03g01545 716 FunFam programmed cell death protein 4 110 262 - -
Eupl03g01545 716 ProSiteProfiles MI domain profile. 119 240 IPR003891 -
Eupl03g01545 716 PANTHER PROGRAMMED CELL DEATH 4 36 701 IPR039778 GO:0045892
Eupl03g01545 716 SUPERFAMILY ARM repeat 585 703 IPR016024 -
Eupl03g01545 716 SUPERFAMILY ARM repeat 117 277 IPR016024 -
Eupl03g01545 716 ProSiteProfiles MI domain profile. 588 707 IPR003891 -
Eupl03g01545 716 ProSiteProfiles MI domain profile. 417 538 IPR003891 -
Eupl03g01545 716 MobiDBLite consensus disorder prediction 1 18 - -
Eupl03g01545 716 MobiDBLite consensus disorder prediction 1 82 - -
Eupl03g01545 716 Pfam MA3 domain 285 394 IPR003891 -
Eupl03g01545 716 Pfam MA3 domain 589 698 IPR003891 -
Eupl03g01545 716 Pfam MA3 domain 419 528 IPR003891 -
Eupl03g01545 716 Pfam MA3 domain 121 231 IPR003891 -
Eupl03g01545 716 Gene3D - 572 706 - -
Eupl03g01545 716 Gene3D - 270 402 - -
Eupl03g01545 716 SUPERFAMILY ARM repeat 280 400 IPR016024 -
Eupl03g01545 716 SMART ma3_7 120 231 IPR003891 -
Eupl03g01545 716 SMART ma3_7 284 395 IPR003891 -
Eupl03g01545 716 SMART ma3_7 418 529 IPR003891 -
Eupl03g01545 716 SMART ma3_7 589 698 IPR003891 -
Eupl03g01545 716 MobiDBLite consensus disorder prediction 20 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01545 Eupl-Chr3 42071526 42077234 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01545 580 698 Eukaryotic Initiation Factors Gene Family AT5G57870 31.967 4.58e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01545 - - psom:113282794 1031.94