Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01540 ATGGCGATCATGGGCTTCATGGGGTACCCTGAGATACTCTTGGCAGTTGTTTGCTTTCTCTTTCTACGCCATTTGAATCGCAATAACGGGGTTTTGATGAATTGGCCATTCTTCGGTATGCTCCCCTCCGTTCTTATCAACGTTCACCGGATGCATGATTGGTCCACCCAATTATTAGCGCGAAATGGGTGCACGTTTGTGTTTAGAGGCCCGTGGTTCATTAACATGAACATATTGTGTACGAGCGATCAGGCCAACGTGCGTTATATCTTGAGCACAAACTTCTCAAATTTCCCAAAAGGGTCCGAATTCAAGGAGATCTTTGATGTTTTGGGAGACGGCATTTTCAATTCAGATTCGGATTTGTGGAGAACCCAACGAAAAATTGCCCATGGACTGATCAACCACCGGAGTTTTCGCCGATTCTCGGAGAAGACTAGCTGGGAGAAAGTAGAGAATGGGCTCGTCCCTGTTCTTGAGCATGTGGCTGACCAGGGCCTAGTTGTGGACTTGCAAGACGTGTTCCAACGGTTGACGTTCGATAGTACGTGTATGTTAGTGTATGGCATCGACCCTGGTTGCCTCTCTGTTGAATTCCCCAAGGTCCCATTCACAGAGGCCTTGGACATTGCCGAGGAGGTGATATTTTACCGGCATGTTGTGCCGGAAAGCTTTTGGAAGTTGCAAAGGTGGCTTGGAATTGGGAAGGAAAAGAAATTGAGTAAAGCTTGGGAGACACTTGATCAATTTTTAGCCCAGTGTATCTCTACGAAACGAGAACAACTGAGCAAAAGGTCTAGAAACAAGGAAGAAGAGGAGAGTGTCGATTTATTAACATCTTACATGGAAGAAGTAGAGATCGGTGGATCGAAATCCGAGGAGTTTTTGAGAGACACATTACTGAATTTCTTGATTGCAGGGAGAGACACTGTGAGTGCAGCTCTAACATGGTTTTTCTGGCTTGTTTCAAGGAACCCATCAGTAGAAACCAAGATCCTAGAAGAACTGAAGGATAAGAAATGGAGGAAGTTGGATATGGAAGGGCTAAGTGGGCTGGTGTATTTACATGGAGCTTTGTGTGAAACGCTACGACTCTTCCCATCGGTACCATTCGAACACAAGAGCCCGCTGCGTCCAGACATCCTTCCTAGCGGCCATAGAATCAATCCAAAAGAGAGGATCTCGCTTTTTTTGTATGCAATGGGAAGAATGGAGGCAATATGGGGTGAAGATTGCTTAGAATTCAAGCCGGAGAGATGGATTTCCGAGCAAGGGGGAATAAAGTATGAACCATCCTATAAGTTCTCGGCATTCAATTCAGGACCCAGGACTTGCCTTGGGAAGGAGGTGGCTTTCACTCAAATGAAGTCTGTTGCAGCAACACTACTCTATAAGTACCATGTTGACGTGGTAGAAGGCCACCCTGTGGCCCCAAAGAATTCTATAATGCTTCATATGAAGCATGGTTTGATGGCGAGGATTAAAAGAAGATGGGTTTGA 1500 0.4573 MAIMGFMGYPEILLAVVCFLFLRHLNRNNGVLMNWPFFGMLPSVLINVHRMHDWSTQLLARNGCTFVFRGPWFINMNILCTSDQANVRYILSTNFSNFPKGSEFKEIFDVLGDGIFNSDSDLWRTQRKIAHGLINHRSFRRFSEKTSWEKVENGLVPVLEHVADQGLVVDLQDVFQRLTFDSTCMLVYGIDPGCLSVEFPKVPFTEALDIAEEVIFYRHVVPESFWKLQRWLGIGKEKKLSKAWETLDQFLAQCISTKREQLSKRSRNKEEEESVDLLTSYMEEVEIGGSKSEEFLRDTLLNFLIAGRDTVSAALTWFFWLVSRNPSVETKILEELKDKKWRKLDMEGLSGLVYLHGALCETLRLFPSVPFEHKSPLRPDILPSGHRINPKERISLFLYAMGRMEAIWGEDCLEFKPERWISEQGGIKYEPSYKFSAFNSGPRTCLGKEVAFTQMKSVAATLLYKYHVDVVEGHPVAPKNSIMLHMKHGLMARIKRRWV* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01540 499 Pfam Cytochrome P450 34 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01540 499 SUPERFAMILY Cytochrome P450 21 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01540 499 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01540 499 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01540 499 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01540 499 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01540 499 Gene3D Cytochrome P450 26 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01540 499 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01540 499 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01540 499 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01540 499 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01540 499 PANTHER CYTOCHROME P450 20 490 - -
Eupl03g01540 499 CDD CYP86A 66 490 - -
Eupl03g01540 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01540 Eupl-Chr3 42008553 42016284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01540 4 497 Cytochrome P450 AT4G39490 50.484 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01540 - - nnu:104599997 709.138