Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01539 ATGGGTTGGCCATGCCTTCTCAACTTATTCACCTCCTTCCCAGCTGAGATATTGATCTTGTTAGCCATGGCTTCTTTCTTCTTCATTTCCTTGTTTTTGAGTCATAAGAGCGGAGTACTTGTGAACTGGCCCATTCTAGGAACCTTCCCATCCCTTCTCCTCAATTCATACCGCTTGCACGATTGGTGCACCGATATCCTTAAAAAGAGTCGGGGCACATTACTACTCGCTGCCCCTTGGTTCACTTGCACGGATACTCTTCTCACTTGCAATCCTGCTAATGTGCACCACATCTTGGTCTCCAACTTCTCAAACTTCCCTAAGGGGTCTGATTATTTTGAGATTTTTGATCTTCTTGGGGATGGGATCTTCAATGCAGACTCCGAGTCCTGGAGGTTCCAAAGGCAAATGGCTCATTCCCATATGCACTCTAGTGCGTTTCGACGATATTTAGCCAAGACTAGTAGAGAAATGGTGGAGAAGACGCTTATGCCCATTCTAGAGCACGTAGCTCACCGAGGCCATATTGTGGATTTGCAAGATGTGTTGCTAAGGTTCACATTCGATAATATATGCGCATTGATCTTCGGTGTCGAAGCTCGATGCCTTTCGATCGATTTTCCGACGATCCCATTTGCAGCAGCCGTCGATGATGCGGAGGAGGCAATCTTCTTTAGGTACATTATGCCTGGGAACCTATGGAAGTTACTAAGATGGTTAAGGATAGGGAAGGAGAGGAAACTGGCTAAGGCTTGGGAAACCATAGACCATTTCATAAATCAATATATTTCAAGTAAAAGGGAAGAACTAAACAAATGCAAAGAGATTGAAGAAGTGAAGGAAGGCGAGAATGAGAGGGATTTATTAACCTCTTATATGATGGATTCCCAGCTTGAAGTTGAAATGGGTAGATCAAATTATGAAAAGTTTCTTCGGGATACCACCTTGAACTTATTGATTGCTGGGAGAGATACTACTAGTGCAGCTCTTACTTGGTTCTTCTGGTTAGTGTCTAGGAATCCAACGGTGGAGATCAGGATCATAGAGGAGCTAAGACTAAGAGCGGAGGGATGCCGGAAGAAGCCAATGGTGTCGGAAACTAGTGATCTAGGTGGACTGGTTTATCTACATGCAGCATTGTGTGAATCTCTGAGGTTGTTCCCACCTCTTCCAATCGATCAGAAGGGCGTATTGCACTCGGATGTGCTTCCTAGCGGAGACGTGGTGCAACCAGGACAGATGATCATGTATTCCATCTACGCCATGGGAAGGATGGAGTGGATATGGGGGGAGGATTGCTTGGAATTCAAGCCAGAGCGATGGATTTCAAAGAGAGGGAACTTGAAGTTTGAACCTCCCTACAAGTTCTTAGCGTTTAACGCTGGGCCACGAACTTGTCTTGGTAAAGACATGGCTTTCACTCAAATGAAGGCCGTTGCAGCTGCTGTGCTCTATAATTTCCATGTTCAGGTGTTGGAAGGCCACCCTGTATTACCTAAAACTTCAGTAATGCTTTTCATGAAGCATGGTTTAATGGTCAGGTTGAGAGAGAGAGAAATGTAG 1563 0.4511 MGWPCLLNLFTSFPAEILILLAMASFFFISLFLSHKSGVLVNWPILGTFPSLLLNSYRLHDWCTDILKKSRGTLLLAAPWFTCTDTLLTCNPANVHHILVSNFSNFPKGSDYFEIFDLLGDGIFNADSESWRFQRQMAHSHMHSSAFRRYLAKTSREMVEKTLMPILEHVAHRGHIVDLQDVLLRFTFDNICALIFGVEARCLSIDFPTIPFAAAVDDAEEAIFFRYIMPGNLWKLLRWLRIGKERKLAKAWETIDHFINQYISSKREELNKCKEIEEVKEGENERDLLTSYMMDSQLEVEMGRSNYEKFLRDTTLNLLIAGRDTTSAALTWFFWLVSRNPTVEIRIIEELRLRAEGCRKKPMVSETSDLGGLVYLHAALCESLRLFPPLPIDQKGVLHSDVLPSGDVVQPGQMIMYSIYAMGRMEWIWGEDCLEFKPERWISKRGNLKFEPPYKFLAFNAGPRTCLGKDMAFTQMKAVAAAVLYNFHVQVLEGHPVLPKTSVMLFMKHGLMVRLREREM* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01539 520 Coils Coil 266 286 - -
Eupl03g01539 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Eupl03g01539 520 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01539 520 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01539 520 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01539 520 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01539 520 PANTHER CYTOCHROME P450 31 512 - -
Eupl03g01539 520 Gene3D Cytochrome P450 38 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01539 520 Pfam Cytochrome P450 80 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01539 520 SUPERFAMILY Cytochrome P450 42 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01539 520 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01539 520 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01539 520 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01539 520 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01539 520 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01539 520 CDD CYP86A 79 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01539 Eupl-Chr3 41989511 41991073 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01539 16 518 Cytochrome P450 AT2G23180 45.294 1.52e-156 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01539 - - ming:122071559 635.18