Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01512 ATGGGTTCGATGGAAGCACCACCACCACCACCAAGAACAACAACAACAGAGAACGACTCAACCCTTAACTGCAACGGCAATCGACAGCAGCCAGACGATGGTTTCGACGCGCTGGCGCCGAACGGTGATTTTACAGGAACCTCGCCTGAGAACATGGCGAACGGTGATTTTACGGGAACTCTCGAAGTCGGGACGCGCGTTATGTGCCGTTGGAGGGACGGAAAACACCATCCCGTCAAGGTCATCGAACGGCGTAAAATGCAGTGCGGTGGGCCCAACGATTACGAGTACTACGTCCATTACACCGAATTCAATAGGAGGCTTGACGAATGGGTTAAGCTTGAACAACTTGATCTTGATTCAGTAGAAGCCAATGTTGATGAAAAGGTGGAGGTCAAGGCAAGAAGCTTGAAAATGACGCGTCACCAGAAACGTAAGATCGATGAAATACATGTTGAGGGCCACGAGGAGCTTGATGCTGCCAGCCTGCGTGAACATGAAGAATTCACAAAAGTGAAAAATATAGCAACCATAGAACTTGGAAGATATGAGATTGAGACATGGTACTTCTCTCCTTTTCCGCCAGAATACAATGACTCTCTGAAGCTGTACTTTTGTGAGTTTTGCCTCAATTACATGAAGCGCAAAGAACAGCTTCAGAGGCATATGAGGAAATGCGATCTCAAGCATCCCCCAGGTGACGAGATCTACCGCAGTGGCACACTGTCAATGTTTGAGGTTGATGGCAAGAAAAACAAGGTGTACAGTCAGAATCTTTGCTGTTTGGCGAAATTGTTTCTTGATCACAAGTCTCTTTACTATGATGTAGATCTGTTTCTGTTTTACATCCTATGTGAATGCGATGATCGAGGATGCCATATGGTTGGATATTTTTCTAAGGAAAAGCATTCAGAGGAATCCTATAATTTGGCTTGCATTCTAACCCTTCCTCCCTACCAAAGAAAAGGATATGGAAAATTTCTAATTGCATTCTCCTACGAACTTTCTAAGAAGGAAGGCAAAGTAGGGACACCTGAAAGACCACTTTCTGACCTTGGACTGTTGAGCTACAGAGGGTACTGGACCAGGGTTCTTTTAGACATTTTGAAAAAGCACAAGAGCAACATCTCCATCAAGGAGCTTAGTGATATGACGGCCATAAAAGCGGACGATATCTTGACCACACTACAGGGCTTGGAACTGATCCAGTACAGGAAAGGGCAGCACGCCATCTGTGCAGACCCCAAGGTCCTGGATCGACATCTAAAAGCTGCTGGCCGTGGGGGCCTTGAGGTTGATGTTGGTAAATTGATCTGGACTCCTTATAAAGAGCAAAGTTGA 1341 0.4594 MGSMEAPPPPPRTTTTENDSTLNCNGNRQQPDDGFDALAPNGDFTGTSPENMANGDFTGTLEVGTRVMCRWRDGKHHPVKVIERRKMQCGGPNDYEYYVHYTEFNRRLDEWVKLEQLDLDSVEANVDEKVEVKARSLKMTRHQKRKIDEIHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDSLKLYFCEFCLNYMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYSQNLCCLAKLFLDHKSLYYDVDLFLFYILCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKSNISIKELSDMTAIKADDILTTLQGLELIQYRKGQHAICADPKVLDRHLKAAGRGGLEVDVGKLIWTPYKEQS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01512 446 SUPERFAMILY Chromo domain-like 59 171 IPR016197 -
Eupl03g01512 446 FunFam Histone acetyltransferase 51 170 - -
Eupl03g01512 446 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 171 442 IPR016181 -
Eupl03g01512 446 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 170 441 IPR002717 GO:0004402|GO:0006355|GO:0016573
Eupl03g01512 446 Pfam MYST family zinc finger domain 172 226 IPR040706 -
Eupl03g01512 446 Gene3D - 229 441 - -
Eupl03g01512 446 MobiDBLite consensus disorder prediction 15 30 - -
Eupl03g01512 446 PANTHER HISTONE ACETYLTRANSFERASE 67 442 - -
Eupl03g01512 446 Gene3D - 349 429 IPR036388 -
Eupl03g01512 446 MobiDBLite consensus disorder prediction 1 56 - -
Eupl03g01512 446 Gene3D - 52 170 - -
Eupl03g01512 446 FunFam Histone acetyltransferase 169 226 - -
Eupl03g01512 446 CDD CBD_MOF_like 64 133 - -
Eupl03g01512 446 CDD NAT_SF 282 340 - -
Eupl03g01512 446 FunFam Histone acetyltransferase 229 357 - -
Eupl03g01512 446 FunFam Histone acetyltransferase 349 428 - -
Eupl03g01512 446 Gene3D - 171 227 - -
Eupl03g01512 446 Pfam MOZ/SAS family 231 408 IPR002717 GO:0004402|GO:0006355|GO:0016573
Eupl03g01512 446 Pfam RNA binding activity-knot of a chromodomain 61 119 IPR025995 -
Eupl03g01512 446 SMART chromo_7 75 130 IPR000953 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01512 Eupl-Chr3 41490478 41518093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01512 61 446 C2H2 Transcription Factor Family AT5G64610 90.933 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01512 K11308 - msin:131222730 783.097