Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01511 ATGAGAGTCATGGAGCGAGAGATCATGACTTCAGTTCTGCTCTGGTTGATTGTGGTGTTTCACCCACTAACAACGATCTATGCGAATATGGAAGGTGACGCGTTGCATAGTCTACGATCCAATTTGGACGATCCTAATAATGTGCTGCAGAGTTGGGATCCTACCCTTGTCAATCCCTGCACATGGTTTCATGTTACATGCAACAATGATAATAGTGTTATAAGAGTTGATCTTGGAAATGCAGCCTTATCTGGTCAACTGGTTTCACAACTTGGTCAGCTTAAAAATTTGCAGTACTTGGAACTTTATAGTAATAACATAAGTGGAACAATTCCTAGTGACCTTGGGAATCTGACGAGCTTGGTGAGCTTGGATCTTTACTTAAACAATTTCACGGGTCCTATTCCAGACACATTGGGCAAGCTGACAAAGTTGCGTTTCCTCCGGCTTAACAACAACAGCCTGGAAGGTCAAATTCCCATGACCTTGACTAATGTCACTGCACTGCAAGTTCTGGATCTATCCAACAACCGTCTAACAGGACCGGTTCCAGACAATGGCTCCTTTTCATTATTCACTCCCATCAGTTTTGCTAATAACTTGGGTCTATGTGGCCCGGTTACTGGGAAGCCTTGCCCAGGATCTCCTCCATTTTCTCCACCTCCTCCATTTGTCCAACCACCACCATCTTCATCTCCAGGAAATAGTGCCTCTAGCACTGGAGCGATTGCTGGAGGAGTGGCTGCTGGTGCTGCTTTACTTTTTGCTGCCCCTGCGATTGGGTTTGCATGGTGGCGTCGACGGAAACCACAGGAGCATTTCTTTGATGTACCCGCCGAAGAGGATCCAGAAGTTCATCTGGGCCAGCTCAAAAGGTTTTCTCTGCGAGAACTACAAGTTGCAACTGATAGTTTTAGCAACAAAAACATTCTGGGTAGAGGTGGATTTGGTAAGGTGTACAAGGGACGTCTAGCCGATGGTTCATTAGTTGCAGTAAAGCGACTAAAGGAAGAGCGTACACCAGGTGGGGAGCTGCAGTTTCAGACAGAAGTAGAGATGATTAGCATGGCGGTGCATCGGAACCTCCTTCGTCTACGCGGTTTTTGCATGACCACGACCGAACGGTTGCTTGTATATCCCTACATGGCTAATGGAAGCGTTGCATCATGTTTAAGAGAACGTCAACCGCAAGAACCCCCACTTGATTGGCCAACCCGGAAGCGTATTGCGTTGGGATCCGCAAGGGGGCTTTCTTATTTGCATGATCATTGTGACCCAAAGATTATCCATCGTGATGTGAAAGCTGCAAATATTTTGTTGGATGAGGAGTTTGAGGCAGTTGTCGGGGACTTTGGGTTGGCTAAACTTATGGACTACAAGGATACCCATGTGACCACAGCTGTTCGAGGCACAATTGGGCATATAGCCCCAGAGTACCTCTCCACGGGAAAGTCATCAGAAAAGACTGATGTTTTTGGGTATGGGATCATGCTTCTAGAGCTTATCACTGGACAGAGGGCATTTGATCTTGCTCGGCTTGCAAACGACGACGATGTTATGTTGCTTGACTGGGTGAAAGGACTTCTGAAAGAGAAGAAGTTGGACATGCTGGTTGATCCCGATCTACAAAATAACTATGTTGAGGCCGAAGTGGAGCAGCTGATCCAGGTTGCACTGCTCTGCACGCAAAGCTCCCCAATGGATCGGCCCAAGATGTCAGAGGTGGTGAGAATGCTTGAAGGTGACGGCTTGGCAGAGAGGTGGGAGGAGTGGCAGAAGGTGGAGGTGGTTCGCCAGGAGGTTGAGCTCGCTCCCCACCGGAACTCCGAATGGATTGTTGACTCCACAGACAACCTCCATGCTGTTGAATTGTCCGGCCCTAGATGA 1887 0.4791 MRVMEREIMTSVLLWLIVVFHPLTTIYANMEGDALHSLRSNLDDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVSQLGQLKNLQYLELYSNNISGTIPSDLGNLTSLVSLDLYLNNFTGPIPDTLGKLTKLRFLRLNNNSLEGQIPMTLTNVTALQVLDLSNNRLTGPVPDNGSFSLFTPISFANNLGLCGPVTGKPCPGSPPFSPPPPFVQPPPSSSPGNSASSTGAIAGGVAAGAALLFAAPAIGFAWWRRRKPQEHFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTTTERLLVYPYMANGSVASCLRERQPQEPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLDMLVDPDLQNNYVEAEVEQLIQVALLCTQSSPMDRPKMSEVVRMLEGDGLAERWEEWQKVEVVRQEVELAPHRNSEWIVDSTDNLHAVELSGPR* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01511 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Eupl03g01511 628 FunFam Somatic embryogenesis receptor-like kinase 1 382 599 - -
Eupl03g01511 628 Pfam Protein kinase domain 306 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01511 628 MobiDBLite consensus disorder prediction 214 230 - -
Eupl03g01511 628 ProSiteProfiles Protein kinase domain profile. 305 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01511 628 FunFam Somatic embryogenesis receptor kinase 1 27 214 - -
Eupl03g01511 628 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Eupl03g01511 628 Gene3D Transferase(Phosphotransferase) domain 1 382 599 - -
Eupl03g01511 628 SUPERFAMILY L domain-like 31 193 - -
Eupl03g01511 628 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 12 590 - -
Eupl03g01511 628 FunFam Somatic embryogenesis receptor kinase 1 274 381 - -
Eupl03g01511 628 Gene3D Phosphorylase Kinase; domain 1 274 381 - -
Eupl03g01511 628 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Eupl03g01511 628 SUPERFAMILY Protein kinase-like (PK-like) 284 580 IPR011009 -
Eupl03g01511 628 MobiDBLite consensus disorder prediction 214 239 - -
Eupl03g01511 628 SMART serkin_6 305 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01511 628 Gene3D Ribonuclease Inhibitor 27 214 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01511 Eupl-Chr3 41468340 41478082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01511 4 628 Receptor kinase-like Gene Family AT1G71830 85.942 0.0 1007
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Eupl03g01511 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01511 K13418 - ming:122082814 1113.21