Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01506 ATGGCAGCACTGCAACAATCACTATTGGCATTCCAAGCCAAATCTCCACCGTCCGCTCGACTATCCGGAAAAACCCTAACTCAGATACCAATCCGATTGTCATTCTCCGGCACAGTCCCATCCCTAAAACTCCCAAAACTCACCCGGAAACTCGTTGGGAAAACCAGACGCCGCGGTGGCGCAACAATGGCGGCGTCTCCCGCGGGGAGCTACGCCTCCGCCCTATCAGAGGTTGCGAAAACAAACGGAACCCTAGAAGCAACGAGCGCAGACATGGAGAATGTCGAGAAAATTTTCTCAGACCCTCTGATCTACGACTTCTTCATAAATCCGACTATCGACATCGAGAAGAAGCGCAAAGTTATCGACGATATCTCGAGCTCCTCAAAACTCCAACCTCACACGGTGAATTTCCTAAACATCTTGATCGACGTGAAGCGGATCGAGCTGATCAAGGACATCGTGAAGGAGTTCGAGTTGTTTTACAACAAACTGACTGATACGGAGCTGGCAATCGTGACTTCGGTGGTGGAGTTGGAATCTCAGCACTTAGCACAGATCGCGAAGGGAGTACAGAGGTTAACGGGAGCGAAGAACGTGAGGGTCAAGACTGTGATTGATCCGTCGCTCGTTGCAGGGTTTACAATCAGGTACGGGAGCTCGGGATCAAAGCTGATCGATATGAGCGTGAAGAAACAGCTCGAAGAGATCGCGAGCGAGCTCGATTTCAGCGATATTACGCTTGCTGTTTGA 753 0.506 MAALQQSLLAFQAKSPPSARLSGKTLTQIPIRLSFSGTVPSLKLPKLTRKLVGKTRRRGGATMAASPAGSYASALSEVAKTNGTLEATSADMENVEKIFSDPLIYDFFINPTIDIEKKRKVIDDISSSSKLQPHTVNFLNILIDVKRIELIKDIVKEFELFYNKLTDTELAIVTSVVELESQHLAQIAKGVQRLTGAKNVRVKTVIDPSLVAGFTIRYGSSGSKLIDMSVKKQLEEIASELDFSDITLAV* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01506 250 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 200 219 IPR020781 GO:0015986|GO:0016020|GO:0046933
Eupl03g01506 250 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 68 166 IPR026015 -
Eupl03g01506 250 NCBIfam ATP synthase F1 subunit delta 69 241 IPR000711 GO:0015986|GO:0046933
Eupl03g01506 250 Gene3D - 68 159 IPR026015 -
Eupl03g01506 250 PANTHER ATP SYNTHASE DELTA CHAIN 59 242 IPR000711 GO:0015986|GO:0046933
Eupl03g01506 250 Pfam ATP synthase delta (OSCP) subunit 68 241 IPR000711 GO:0015986|GO:0046933
Eupl03g01506 250 Hamap ATP synthase subunit delta [atpD]. 63 243 IPR000711 GO:0015986|GO:0046933
Eupl03g01506 250 PRINTS ATP synthase delta subunit signature 67 86 IPR000711 GO:0015986|GO:0046933
Eupl03g01506 250 PRINTS ATP synthase delta subunit signature 198 213 IPR000711 GO:0015986|GO:0046933
Eupl03g01506 250 PRINTS ATP synthase delta subunit signature 136 147 IPR000711 GO:0015986|GO:0046933
Eupl03g01506 250 PRINTS ATP synthase delta subunit signature 147 161 IPR000711 GO:0015986|GO:0046933
Eupl03g01506 250 PRINTS ATP synthase delta subunit signature 216 234 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01506 Eupl-Chr3 41370540 41371680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01506 1 249 Primary Pumps ATPases AT4G09650 57.937 2.64e-96 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01506 K02113 - ming:122073916 362.844