Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01478 ATGGTGGCGGCAAAGAAGACGACTCATGAGAGCATCAACAACAGGCTCGCTCTTGTAATGAAGAGCGGGAAGTACACTCTCGGATACAAAACCGTCCTTCGCACACTCAGAAACTCCAAAGGGAAACTCATAATTATTTCAAACAATTGCCCACCTCTGCGGAAGTTCGAGATGGAGCACTATGCGATGCTTGCAAAGGTTGGCGTTCACCATTTCAATGGAAGTAACTGGTTTAATCTTACTGATCCAATGTAA 255 0.451 MVAAKKTTHESINNRLALVMKSGKYTLGYKTVLRTLRNSKGKLIIISNNCPPLRKFEMEHYAMLAKVGVHHFNGSNWFNLTDPM* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01478 84 PANTHER RIBOSOMAL PROTEIN L30 1 77 IPR039109 GO:0003723
Eupl03g01478 84 SUPERFAMILY L30e-like 11 76 IPR029064 -
Eupl03g01478 84 FunFam 60S ribosomal protein L30 1 81 - -
Eupl03g01478 84 ProSitePatterns Ribosomal protein L30e signature 1. 22 46 IPR022991 -
Eupl03g01478 84 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 11 76 IPR004038 -
Eupl03g01478 84 Gene3D - 2 78 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01478 Eupl-Chr3 41060476 41061606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01478 1 76 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 76.923 1.15e-39 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01478 K02908 - sspl:121760011 139.428