Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01470 ATGGCAGTGTCAACACTAACGGTCGCAGCAGCGAAGCCAAATCTCCTCCAGCAAACCTTCAAACCCAAACCTTCTTCATTCACCTTCAAAGCCAGTGCTAATGGAGCATCTAATCTCTCTCTGGAATCGATTTCTACTACTAAGAGGCGGATTTTCGATCTGGGTATTGGCCTTTTAGCAGCCTCAATGGTAATTTCCTCGCCTCTGGATGCAAATGCGACCAGAATTGAGTACTACGCCACTGTCGGCGAGCCTTCCTGTGACCTCAACTTCGTTCAGTCCGGGCTCGGTTACTGCGATGTTGCGGTCGGGACTGGCGATGAAGCCCCTCTCGGTGAGCTTATCAATATTCATTATACTGCAAGGTTTGCAGATGGGATAGTCTTTGACAGCAGTTATAAACGCGCAAGACCACTCACTATGCGCATTGGTGTTGGCAAGGTCATTAAGGGATTGGATCAGGGGATTTTAGGGGGCGATGGTGTACCTCCGATGCTTGTCGGGGGGAAACGTAAACTTCAGATACCTCCAGAATTAGCGTATGGGCCTGAACCTGCCGGGTGCTTTTCAGGTGACTGCAACATACCTGCCAATGCAACTCTTGTCTATGACATTAATTTTGTTGGAGTGTACAAGTGA 639 0.4883 MAVSTLTVAAAKPNLLQQTFKPKPSSFTFKASANGASNLSLESISTTKRRIFDLGIGLLAASMVISSPLDANATRIEYYATVGEPSCDLNFVQSGLGYCDVAVGTGDEAPLGELINIHYTARFADGIVFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMLVGGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGVYK* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01470 212 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 1 212 IPR044183 GO:0009507
Eupl03g01470 212 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 109 206 IPR001179 GO:0003755
Eupl03g01470 212 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 112 211 IPR001179 GO:0003755
Eupl03g01470 212 Gene3D - 85 210 IPR046357 GO:0003755
Eupl03g01470 212 SUPERFAMILY FKBP-like 91 210 - -
Eupl03g01470 212 FunFam Peptidylprolyl isomerase 84 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01470 Eupl-Chr3 40929747 40934831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01470 92 208 Calmodulin-binding Proteins AT3G25230 40.336 6.13e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01470 K01802 - nnu:104605912 340.502