Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01458 ATGGGTCGTTCCACTGATGAAGAGCTTCAAATGAAAGAGATAGACATTGCAAGCATGCCATCCTCACGTCGTCACACAGACAGCTTACCATACGTTCACAAGGTGGGGGTGCCCCTACGGCAGAACCTGTTAAAGGAGTTCACATCTACAGTGAAGGAAACATTCTTTGCGGATGACCCTTTGCGCCCTTTCAAGGACCAACCAGGGTCAAAAAAGTTCATCCTAGGCCTCCAGACCGTTTTTCCCATTCTCAAGTGGGGGAGAGACTACAATTTAACTAAACTCAAAGGAGATATCATTGCAGGACTCACCATTGCAAGTCTTTGTATTCCTCAGGACATTGGATATGCAAAGCTTGCAAATCTTGAGCCCCAGTACGGACTGTATTCCAGTTTTGTTCCACCATTGATTTATGCCTTTATGGGAAGTTCAAGAGATATTGCCATTGGACCAGTGGCTGTGGTGTCTCTCTTGCTGGGGACTCTGCTCCAGGACGAGATAGATCCTGTTCAACATCCAGCAGAGTATCTTCGGCTTGCATTTACAGCTACCTTTTTCGCCGGGATCACTCAAGTCACACTTGGATTTTTCAGGATCGGTGTCGTGGCTGGTATGATAGCTTTGACGGAAGCTATAGCAATTGGAAGAACATTTGCATCCATGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTGGCACTAGGAACGATGAATGTGGTTGGTTCAATGACATCCTGTTACGTGGCTACAGGTTCCTTCTCTCGCTCAGCCGTGAATTACATGTCCGGCTGCCAAACTGCCGTCTCCAACATTGTGATGTCCTGTGTCGTCCTCCTGACCCTGGAACTGATAACACCCCTCTTTAAGTACACCCCGAATGCGATTCTTTCTTCTATCATTATTTCTGCCGTGATCAGCCTAATCGACGTTGAGGCAGCACTTCTCATTTGGAAGATCGATAAATTTGATTTTGTTGCTTGCATGGGAGCTTTCTTTGGTGTAATTTTTGCCTCTGTTGAGATGGGCCTTCTAATCGCTGTTTCAATATCCTTCGCAAAAATCCTCCTCCAAGTAACAAGGCCACGGACAGCGATACTTGGGAGGCTCCCCAGGACATCTGTCTACAGGAACATTGAACAATATCCTGATGCTAAGAAGGTTCCAGGCGTCCTAATCGTGAGAGTTGATTCTGCGATCTACTTTTCCAACTCCAACTATATTAAGGAGAGGATCTTGAGGTGGTTGATTGATGAGGAAGAAAAATTGAAAGCACAAGACCTGCCAAAAATCGAGTTCTTGATCGTGGAGATGTCACCTGTTACTGACATTGACACCAGTGGGATCCATGCACTGGAAGAGTTGTACAGGAATCTCCAAAAGAGAGATATTCAGCTTGTTCTGGCCAACCCCGGGCAAGCAGTGATCGACAAGCTCCATGCATCCAAGTTTGCAGGTCTGAGCCTAGGATCTTATCCACCATTAGAGTATGGCAGTAGGAACAGCGAACAGACACCTGTCCAAGTCCGCAGACCAGATCGGCTAGTAGAAGATCTTCCTCACGGCTGCAGATGCTGTGATCCTGAAGAGCGAGCAGATCACGGAGATGAGAGTGGCGATCCCATCATGCATCCCGTACTCTTCTGCCACCAGACTTCACGAACAACAACAAAACCGAAAACCTCCCTCCTTCCCCGCGTTTCAAACCCTAAAGTCTTCTCTCTTTTCTTCTCCCCCTCTTCAAAACCCCAACCGAAACCCAATCCCAAAACCCTAAAACCTCGTTTCGTGCCTAAAGAGAAAACCCTAGTTCTCACGAAAGACGAGAGGTTGGGTTTGAACCCTGTTAATGCCGCATCAACTGAGACTTCGACCACAATTGCCGCCATTGTTACTTCCTTGGGCGGTCGGCCTGGCGCGGTTGGGATTGTTCGGTTATCGGGTCCGTCGGCATTGGCTGTTGCGGCCCGTGTCTTTCGGCCTTGTATGAAGAAGAAGAAGAAAAGCTCTGGTTCGGCTTCATGGAGGCCCAAAAGCCATTTTGTGGAGTATGGTGTGGTTTCCGACCTTCAGGGGAATGTTGTCGACGAGGTCTTGGCAATACCCATGTTGGCACCTAGATCTTACACCCGAGAGGATGTGGTGGAGCTCCAGTGCCATGGGAGTGATGTGTGTCTGCATCGAGTGTTAAGAGCTTGTTTAGAGGCTGGGGCAAGACTTGCAGAACCAGGCGAGTTCACTCTCCGCGCTTTTCTAAATGGACGCTTAGATCTCTCCCAAGCCGAAAATATTGAAAAACTAATTTCAGCCAAGTCTGTGGCTGCCGCCGACGCAGCATTGGCAGGAATTCAGGGAGGCTTCTCTGCTTTAGTCAAATCACTGAGAATGCAATGCATCGAGCTGCTTGCAGAGATTGAAGCTCGTTTAGATTTTGATGACGAGATGCCACCATTAGATTCCAATTTATTGATGGATACGATACATGCCATGTGGCAAGATGTGGAGCAGGCCTTGGAGACTGCCAATTATGACAAACTTCTACAATCCGGATTACAGATAGCAATTGTTGGGCGGCCAAATGTTGGGAAGTCAAGTCTCCTCAATGCATGGAGCAAACTTGCAGAGTGA 2628 0.4779 MGRSTDEELQMKEIDIASMPSSRRHTDSLPYVHKVGVPLRQNLLKEFTSTVKETFFADDPLRPFKDQPGSKKFILGLQTVFPILKWGRDYNLTKLKGDIIAGLTIASLCIPQDIGYAKLANLEPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTLLQDEIDPVQHPAEYLRLAFTATFFAGITQVTLGFFRIGVVAGMIALTEAIAIGRTFASMKDYQLDGNKEMVALGTMNVVGSMTSCYVATGSFSRSAVNYMSGCQTAVSNIVMSCVVLLTLELITPLFKYTPNAILSSIIISAVISLIDVEAALLIWKIDKFDFVACMGAFFGVIFASVEMGLLIAVSISFAKILLQVTRPRTAILGRLPRTSVYRNIEQYPDAKKVPGVLIVRVDSAIYFSNSNYIKERILRWLIDEEEKLKAQDLPKIEFLIVEMSPVTDIDTSGIHALEELYRNLQKRDIQLVLANPGQAVIDKLHASKFAGLSLGSYPPLEYGSRNSEQTPVQVRRPDRLVEDLPHGCRCCDPEERADHGDESGDPIMHPVLFCHQTSRTTTKPKTSLLPRVSNPKVFSLFFSPSSKPQPKPNPKTLKPRFVPKEKTLVLTKDERLGLNPVNAASTETSTTIAAIVTSLGGRPGAVGIVRLSGPSALAVAARVFRPCMKKKKKSSGSASWRPKSHFVEYGVVSDLQGNVVDEVLAIPMLAPRSYTREDVVELQCHGSDVCLHRVLRACLEAGARLAEPGEFTLRAFLNGRLDLSQAENIEKLISAKSVAAADAALAGIQGGFSALVKSLRMQCIELLAEIEARLDFDDEMPPLDSNLLMDTIHAMWQDVEQALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKLAE* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01458 875 Gene3D tRNA modification GTPase MnmE domain 2 756 850 IPR027368 -
Eupl03g01458 875 Gene3D - 851 871 IPR027417 -
Eupl03g01458 875 FunFam Sulfate transporter 31 361 491 - -
Eupl03g01458 875 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Eupl03g01458 875 Gene3D Probable tRNA modification gtpase trme; domain 1 612 755 IPR027266 GO:0005515
Eupl03g01458 875 PANTHER SULFATE TRANSPORTER 202 485 IPR001902 GO:0016020|GO:0055085
Eupl03g01458 875 Gene3D STAS domain 361 491 IPR036513 -
Eupl03g01458 875 Pfam STAS domain 382 485 IPR002645 -
Eupl03g01458 875 Pfam 50S ribosome-binding GTPase 852 871 IPR006073 GO:0005525
Eupl03g01458 875 Pfam Sulfate permease family 203 329 IPR011547 GO:0016020
Eupl03g01458 875 ProSiteProfiles STAS domain profile. 381 484 IPR002645 -
Eupl03g01458 875 SUPERFAMILY SpoIIaa-like 383 485 IPR036513 -
Eupl03g01458 875 CDD STAS_SulP_like_sulfate_transporter 382 484 - -
Eupl03g01458 875 CDD TrmE_N 626 754 IPR018948 -
Eupl03g01458 875 FunFam tRNA modification GTPase MnmE 621 755 - -
Eupl03g01458 875 Pfam GTP-binding protein TrmE N-terminus 626 755 IPR018948 -
Eupl03g01458 875 SUPERFAMILY Folate-binding domain 625 755 - -
Eupl03g01458 875 Pfam MnmE helical domain 758 851 IPR025867 -
Eupl03g01458 875 SUPERFAMILY TrmE connector domain 756 861 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01458 Eupl-Chr3 40801774 40824223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01458 197 487 Inorganic Solute Cotransporters AT1G22150 79.725 9.26e-148 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01458 K17470 - mof:131161919 501.516