Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01456 ATGGATATTTCTCTAAGCTCTAGCTTAAATGGTTCTAAGCTACTCCTACGTTCTCCTCCCTCTCACAACTTGCAAGGACCTCGTAAGTTCAATGTTGTTTCATGTAGAGCTGCTAAGTTGGCTGGAGAAAAAGAGACCACCAACTTTTATAAACTTTTTTCTCTTCATGCTGGGAATGTGGGTGCAGATGAGATAAAGAGGGCATATAGAACCATGGCCCTTCAGTACCACCCTGATGTTTGTCACCCATCCAGAAAAGAAGAATCAACCCAGATGTTCGTGGAGCTTCACAGGGCGTACAAGACCCTATCGGATCCAATGTCACGTGAACAGTATGATTATGAATTGGGTTTGAGCAAATTTGAGAGAATATACAAGAGCGAAGCGGGAGGACTTTCGAGAGAGAGGTGGGAAGACCAGCTTTGCGAATTAAGGAAGAAGTCTGATAATCGTATGGCACGGAAGGAAGGGTCTTGGGGAAGTAGATTGAGATCTCAACGCAAATAG 507 0.4418 MDISLSSSLNGSKLLLRSPPSHNLQGPRKFNVVSCRAAKLAGEKETTNFYKLFSLHAGNVGADEIKRAYRTMALQYHPDVCHPSRKEESTQMFVELHRAYKTLSDPMSREQYDYELGLSKFERIYKSEAGGLSRERWEDQLCELRKKSDNRMARKEGSWGSRLRSQRK* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01456 168 ProSiteProfiles dnaJ domain profile. 48 116 IPR001623 -
Eupl03g01456 168 SUPERFAMILY Chaperone J-domain 45 116 IPR036869 -
Eupl03g01456 168 SMART dnaj_3 47 108 IPR001623 -
Eupl03g01456 168 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 15 167 - -
Eupl03g01456 168 Pfam DnaJ domain 48 113 IPR001623 -
Eupl03g01456 168 Gene3D DnaJ domain 36 131 IPR036869 -
Eupl03g01456 168 MobiDBLite consensus disorder prediction 149 168 - -
Eupl03g01456 168 CDD DnaJ 48 105 IPR001623 -
Eupl03g01456 168 PRINTS DnaJ domain signature 88 108 IPR001623 -
Eupl03g01456 168 PRINTS DnaJ domain signature 69 84 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01456 Eupl-Chr3 40794284 40794930 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01456 63 113 C2H2 Transcription Factor Family AT1G74250 46.296 8.84e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01456 - - csin:114283171 173.326