Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01455 ATGGAGATTTCTTTCCATTTGAATCCCAAAATAGGAAAAAAAGTTCCATTATTTCTCAAAACAAGGTCCTTACAGAACTTTTCTAAGACCAACATAATTTCATGTAGAGCAAACAGGTTGGCCATTCATGAAAGAGGGAGCACCAACTTCTATGAAGTTCTTTCTCTTAATTCTGAGAATGTTGGTTTTGATGAGATAAAGAAGGCTTACAGAAGCATGGCTCTTCAATACCACCCTGATGTTTGTCCTCCTTCTAGGAAGGAAGAATCAACTAGAAGATTCGTCGATCTTCAACGGGCTTATGAAACACTATCCGACCCAATTTTGCGTGAGAAGTATGATTATGAATTAAGATTGGGTGATTCAATAGAGCGTGGAGTAGGTGGAATGCGATCGAATTTTCCTAAAGAGGTGTGGGAAAACCAGCTTCACGAACTAAAAAGAAGGTCTCGTGATCGAATGGAGAGGAAGAAAAACAGATACATGTAG 489 0.3885 MEISFHLNPKIGKKVPLFLKTRSLQNFSKTNIISCRANRLAIHERGSTNFYEVLSLNSENVGFDEIKKAYRSMALQYHPDVCPPSRKEESTRRFVDLQRAYETLSDPILREKYDYELRLGDSIERGVGGMRSNFPKEVWENQLHELKRRSRDRMERKKNRYM* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01455 162 SMART dnaj_3 48 109 IPR001623 -
Eupl03g01455 162 Gene3D DnaJ domain 39 132 IPR036869 -
Eupl03g01455 162 Pfam DnaJ domain 49 114 IPR001623 -
Eupl03g01455 162 ProSitePatterns Nt-dnaJ domain signature. 94 113 IPR018253 -
Eupl03g01455 162 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 20 158 - -
Eupl03g01455 162 PRINTS DnaJ domain signature 89 109 IPR001623 -
Eupl03g01455 162 PRINTS DnaJ domain signature 52 70 IPR001623 -
Eupl03g01455 162 PRINTS DnaJ domain signature 70 85 IPR001623 -
Eupl03g01455 162 CDD DnaJ 49 106 IPR001623 -
Eupl03g01455 162 ProSiteProfiles dnaJ domain profile. 49 117 IPR001623 -
Eupl03g01455 162 SUPERFAMILY Chaperone J-domain 40 118 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01455 Eupl-Chr3 40789598 40790303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01455 51 114 C2H2 Transcription Factor Family AT1G74250 44.776 4.00e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01455 - - csin:114320189 198.364