Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01451 ATGGCAGTGGCTGCAACATCGGCTGCAGTACTCAATGGCGTTGGGTCTCCCTTCTTGTCCGGAGGGAAGAGGAGCCAGAGCTTGTTGTCGTCCAGCATCGGAGCCAGAGTTGGTGGTGTCGTCGCTCCTCGCAGGCTCATCGTCGCCGCTGCCGCTCCAAAGAAATCTTGGATTCCTGCCGTTAAAGGAGGTGGCAACTTAATCGACCCCGAGTGGCTAGATGGCTCGCTCCCAGGAGATTTCGGGTTCGACCCGTTGGGGCTAGGCAAGGACCCAGCCTTCCTCAAGTGGTACAGAGAAGCAGAGCTGATCCACGGGCGATGGGCAATGGCAGCAGTTGTTGGCATCTTCGTTGGCCAGGCCTGGAGCGGTATCCCATGGTTCGAAGCCGGTGCGGACCCCAGTGCAATCGCACCCTTCTCCTTCGGCACTCTCTTAGGCACCCAACTTATTCTCATGGGGTGGGTAGAGAGCAAGAGGTGGGTCGACTTCTTTAACCCGGAGTCTCAATCTGTGGAGTGGGCGACGCCATGGTCCAGGACGGCCGAGAATTTCTCTAATGCAACCGGGGAGCAGGGCTACCCAGGCGGTAAATTCTTCGACCCATTGTCGGTCGCTGGCACGATCCAGAATGGTGTGTACATCCCAGACGAGGAGAAGCTAGAGAGACTGAAGTTGGCTGAGATCAAGCATGCCCGGCTTGCCATGTTGGCTATGCTCATATTCTACTTCGAGGCCGGGCAAGGAAAGACACCCCTCGGAGCTCTGGGCTTGTAA 777 0.5753 MAVAATSAAVLNGVGSPFLSGGKRSQSLLSSSIGARVGGVVAPRRLIVAAAAPKKSWIPAVKGGGNLIDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRTAENFSNATGEQGYPGGKFFDPLSVAGTIQNGVYIPDEEKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01451 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Eupl03g01451 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 69 256 IPR001344 GO:0009765|GO:0016020
Eupl03g01451 258 FunFam Chlorophyll a-b binding protein, chloroplastic 70 257 - -
Eupl03g01451 258 SUPERFAMILY Chlorophyll a-b binding protein 65 258 - -
Eupl03g01451 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01451 Eupl-Chr3 40704750 40706835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01451 5 258 Chloroplast and Mitochondria Gene Families AT1G15820 80.309 2.22e-148 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01451 K08917 - ming:122059814 486.108