Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01436 ATGGGATCTCCCTCTTCCCACACCCTCATCTCCTCCCTAACTAATCTTCTTGTATTTCTTGTTCTATTTCCCGGCTATCTGACCGCCCAAAACGATCCTCCGGATGGATACAACGGGAAGGAGAGAGACGCCCTTTACGCTCTCAAGGCTGACTTCAACCACCATTTCCTCAACGAAAACTGGACTGGTCTCCAATGCTACATGAATAACCCGCCAAGGTGGTTTGGAATTCAATGCTTTAACGGTCGAGTTACGGGAATATCCTTAGAAAGTATGGGGATCACCGGAAAAGTCAACGTTCATGCAATGGTCAATCTTTCTGAGCTGTCTAGCATAAGCTTCAGGAACAATTCGGTGTCAGGAAACTTAATGGATTTCTCGTCGAATCCAAAATTGACGTATGTTGATCTATCCAGCAATTTGTTTGATGGACCCATCTCGGATTCGTTACTGGGTCTTGATTTCTTGGTGTCGTTGCAGCTCCAAGGTAACAATTTGATCGGTCCCATCCCGGAATTTAGTCAATCGAGCTTGAGAGAGTTCAATGTCTCTAACAACAATCTTTGGGGAGAAATTCCACAAACGCGTCTTCTCCAATCGTTTAACTACTCTTCATATTTTGGTAATCCGGGTTTGTGTGGTCCACCTTCTCCGATTACTTGTAGTATTGCTAATAATACTGTCCCTTCAGCACCGGATACAAATGGGAAGAAGAAGAAGAAATTTTGGAATGGGGCAACTTTGGTTGCGCTTTTTGTTGTGTTGGATGTTATTGCACTAACTCTTGTAGTGATGCTCTTCGTTATTTACTACAAGAAAGCGAAAAAGAACAAAAGAGAACTGAAGATGAAGGAGATGGAAGTAGAGGAGAAGAAGAAGAATCAAACGAAGATAGAAAATGGACAGAGAAGAGCAGTAATTGCTAAGGAAGACAGAGGGAAGCTCACATTCATGGATGAAGCACGGGATTTTGAACTTAGTGATCTTCTGAAAGCTTCAGCTGAGGGATTGGGGAAAGGGAATTTTGGGAATGCTTATAAAGCTATGCTGGACAATGGACCGAGCGTTGTAGTTAAGCGGCTAAAGGATCTTAAGCCGTTAACTAGCGAGGAATTCGGAAAGCAGATAACGGTGATCGCCCATCTGAAGCACCCCAATTTGTTGCCTCTTCTTGCTTATTACTATTCCAAAGATGAGAAGCTGTTAGTGTACAAGTTGGCGCAGAATGGCAACCTGTTCAACCGCATTCATGGAGGGAGAGGGAATAACCGGATTCCTTTCAAATGGAACTCAAGGTTATCAATAGCCCAAGGTGTAGCACGAGCCATGGAGTTTCTACATCTCAACACCAAGTCACAGACCATCCCTCATGGGAACTTAAAATCTTCAAACGTTCTTCTGGACGAGAATGAAGTGGCTCTTGTTTCTGACTATGGCCTCGCTTCACTAATTGCACTGCCCATCACAGCCCAGCAGATGACTTCATACAAGTCTCCAGAATATCAAAACCGTAGAAAAATCTCAAAGAAATCTGACGTATGGAGCTATGGTTGCCTTCTCCTAGAACTGCTAACAGGTAGAATCTCTACTTACTCGGCTCCCCAAGGGATCAACGGTGTGGATCTATGCAGTTGGGTTCATAGAGCAGTTAGAGAGGAATGGACAGCCGAGATTTTCGATTTAGAGATCACTGTGCAGAGAAATGCTGCAGAAGGATTGCTGAGATTACTACAAATTGCAATGCGGTGTTGCGATAAGTCACCAGAGAAGCGCCCGGAGATGGGAGAGGTGGTGAGAGAGGTTGAAGATATAAAAGTTAGCGACTCAGAGGATGATGATGAATTCTCATTCGATCGATCATTCACCACCGAAGATTCATTTTCAACTAATGCCTCAGGGAATATTGGAGAGGAGAGATAG 1920 0.4401 MGSPSSHTLISSLTNLLVFLVLFPGYLTAQNDPPDGYNGKERDALYALKADFNHHFLNENWTGLQCYMNNPPRWFGIQCFNGRVTGISLESMGITGKVNVHAMVNLSELSSISFRNNSVSGNLMDFSSNPKLTYVDLSSNLFDGPISDSLLGLDFLVSLQLQGNNLIGPIPEFSQSSLREFNVSNNNLWGEIPQTRLLQSFNYSSYFGNPGLCGPPSPITCSIANNTVPSAPDTNGKKKKKFWNGATLVALFVVLDVIALTLVVMLFVIYYKKAKKNKRELKMKEMEVEEKKKNQTKIENGQRRAVIAKEDRGKLTFMDEARDFELSDLLKASAEGLGKGNFGNAYKAMLDNGPSVVVKRLKDLKPLTSEEFGKQITVIAHLKHPNLLPLLAYYYSKDEKLLVYKLAQNGNLFNRIHGGRGNNRIPFKWNSRLSIAQGVARAMEFLHLNTKSQTIPHGNLKSSNVLLDENEVALVSDYGLASLIALPITAQQMTSYKSPEYQNRRKISKKSDVWSYGCLLLELLTGRISTYSAPQGINGVDLCSWVHRAVREEWTAEIFDLEITVQRNAAEGLLRLLQIAMRCCDKSPEKRPEMGEVVREVEDIKVSDSEDDDEFSFDRSFTTEDSFSTNASGNIGEER* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01436 639 Gene3D Transferase(Phosphotransferase) domain 1 407 626 - -
Eupl03g01436 639 Gene3D Ribonuclease Inhibitor 38 174 IPR032675 -
Eupl03g01436 639 Gene3D Phosphorylase Kinase; domain 1 295 405 - -
Eupl03g01436 639 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 609 IPR046959 -
Eupl03g01436 639 SUPERFAMILY Protein kinase-like (PK-like) 336 606 IPR011009 -
Eupl03g01436 639 CDD STKc_IRAK 337 604 - -
Eupl03g01436 639 ProSiteProfiles Protein kinase domain profile. 331 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01436 639 Coils Coil 271 294 - -
Eupl03g01436 639 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Eupl03g01436 639 SUPERFAMILY L domain-like 56 216 - -
Eupl03g01436 639 MobiDBLite consensus disorder prediction 591 639 - -
Eupl03g01436 639 MobiDBLite consensus disorder prediction 591 605 - -
Eupl03g01436 639 MobiDBLite consensus disorder prediction 621 639 - -
Eupl03g01436 639 Gene3D Ribonuclease Inhibitor 176 217 IPR032675 -
Eupl03g01436 639 Pfam Protein kinase domain 335 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01436 Eupl-Chr3 40551013 40553971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01436 4 620 Receptor kinase-like Gene Family AT5G58300 36.489 2.64e-114 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl03g01436 Pkinase 4.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01436 - - msin:131244339 725.702