Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01423 ATGAATTTCTCTTTCTACAAAAATCTCATCTCACTCTCCCTCAAGACCCCTCCACATTTCTCCAATAAACCTTACTTCTCCCTCTCAGTCTCGACATTCTTCTTCTCCTCCGGACCCAAAAAATCAAAATCCGTTGTCGTTGCTGATTACCTGATCAACCGACATGGGTTCTCTGTGGAAACCGCTTCGATAGCATCGGCTGTCCTAGAACGTATCCGGGATCATGAAAAATCTGATTCCATACTTGCCTTCCTCGAGGAAAGTGGGTTCTCAAAAACCCATCTCGAGAAAATTATCAAACACGTCCCAGGCGTTCTGTCTTCCGATCTTGACAAAACCATAAAGCCCAAAATCAAGTTATTTCAAGACTTGGGTTTCGCCCAAAAAGACCTCGCAGACATAATTGCGTCCGACCCGTGGGTTCTGACTCGAAGTGCAGACAAGCAGCTCCTCCCTTCAATTGTCCTGTTGAAGAGTGTTTTGGGTACAAGCACTAGCGTCTCTAAGGTTCTCAAGCTCTCTGGGTGGTTCCTCAAACATGATTTAGAGAAGACTATGATCCCGAATATAGAATTCATGACGAGCTGCGGGATTAGCATGTCCCAGATCACCAAATTTGTATTTAATTTTCCAAGGTTCTTTGTTCTTAAGCCAGATAACATAAAGGCTTACGTCGAGAGGGTCGACGAATTGGGTTTTGATCGAAAATCCAGGATGTTCCTTCATGCGATTCGGACCTTGAGCTCTATGACGAGAGAGAATTGGGAGCTCAAATTACATCTCTTTCGGAGTCTAGGGTTCTCAGAAAATGATATCTCGTACATGTTTAGGAGAGCCCCGCAGGTGTTTGCCGTCTCAGAGAGGAAAATTAGGGAGGGCGTAGAATATCTACTTAGCACATGGATGTGTGATGCTTCTTACATAGTTCTCAATCCAGAACTGCTTATTTACAGCTTGGAAGGCAGGACTAAACCCAGGATCCAGATTTTGGAGATTCTGGAGAGAAAGAATTTGGTTTCTAAAAGCATTAGTCTTGCTTCAATCTGCAAGATGAAGAATGAGAAGTTCTTTCAGAAATTTGTGTCTCCATATGAAAATGAAGTTGGGAATCTTTACATAGCCAAGAAGGGATCATAG 1137 0.4327 MNFSFYKNLISLSLKTPPHFSNKPYFSLSVSTFFFSSGPKKSKSVVVADYLINRHGFSVETASIASAVLERIRDHEKSDSILAFLEESGFSKTHLEKIIKHVPGVLSSDLDKTIKPKIKLFQDLGFAQKDLADIIASDPWVLTRSADKQLLPSIVLLKSVLGTSTSVSKVLKLSGWFLKHDLEKTMIPNIEFMTSCGISMSQITKFVFNFPRFFVLKPDNIKAYVERVDELGFDRKSRMFLHAIRTLSSMTRENWELKLHLFRSLGFSENDISYMFRRAPQVFAVSERKIREGVEYLLSTWMCDASYIVLNPELLIYSLEGRTKPRIQILEILERKNLVSKSISLASICKMKNEKFFQKFVSPYENEVGNLYIAKKGS* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01423 378 PANTHER CGI-12 PROTEIN-RELATED 43 365 IPR003690 GO:0003690|GO:0006355
Eupl03g01423 378 Pfam mTERF 153 356 IPR003690 GO:0003690|GO:0006355
Eupl03g01423 378 Pfam mTERF 82 169 IPR003690 GO:0003690|GO:0006355
Eupl03g01423 378 Gene3D Transcription termination factor 3, mitochondrial 148 370 IPR038538 -
Eupl03g01423 378 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Eupl03g01423 378 SMART mt_12 168 199 IPR003690 GO:0003690|GO:0006355
Eupl03g01423 378 SMART mt_12 305 336 IPR003690 GO:0003690|GO:0006355
Eupl03g01423 378 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Eupl03g01423 378 SMART mt_12 132 164 IPR003690 GO:0003690|GO:0006355
Eupl03g01423 378 SMART mt_12 204 234 IPR003690 GO:0003690|GO:0006355
Eupl03g01423 378 SMART mt_12 238 268 IPR003690 GO:0003690|GO:0006355
Eupl03g01423 378 FunFam Mitochondrial transcription termination factor-like 146 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01423 Eupl-Chr3 40311228 40312969 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl03g01423 mTERF 2.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01423 K15031 K20729 vvi:104882482 430.639