Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01403 ATGTGTGGAATTCTCGCCGTCTTCGGCTGCATCGACAATTCTCAGGCCAAACGTTCCCGAATCATTGAACTCTCTCGAAGGTTGCGCCATAGAGGTCCTGATTGGAGTGGCTTACATTGTTATGAGAATTGTTATCTTTCTCACCAACGATTGGCTATTGTAGACCCTACTTCTGGAGATCAGCCGCTTTACAATGAAGACAAGACGATTGTCGTTACGGTAAATGGGGAGATTTATAACCATGAAGCATTGAGAGCGAAGCTGAGTTCTCATCAATTCCGAACTGGAAGTGACTGTGAAGTGATTGCCCACCTTTACGAGGAATATGGAGAGGATTTTGTGGACATGTTGGATGGCATGTTCTCTTTTGTCCTTCTTGACACCCGTGACAAAAGTTTCATTGCTGCTCGAGATGCTATTGGTGTTACCCCCCTATACATGGGCTGGGGCCTTGATGGATCAACTTGGTTTGCTTCAGAAATGAAAGCTTTGAGTGATGATTGTGAACGTTTCATGTCCTTTCTTCCTGGGCATATATATTCTAGCAAACGTGGCGAGCTTAGAAGGTGGTACAATCCACCATGGTTTTCAGAGCGCATACCATCAACTCCTTATGATCCATTAGTTTTACGTGAGACCTTTGAGAAGGCTGTAGTTAAGAGACTTATGACTGATGTGCCATTTGGCGTACTTTTATCCGGAGGACTTGATTCGTCACTTGTTGCTGCTGTGGCTTCACGCTACTTGGCAGGATCAAAAGTTGCTAGACAGTGGGGATCACAGCTACATACCTTCTGCATTGGTTTGAAGGGATCTCCAGATCTCAAAGCTGCAAGGGAGGTTGCGGATTATCTCGGCACTCATCACCTTGAGTTTCACTTCACAGTTCAGGAGGGCCTAGATGCTCTTGAGGAAGTTATTTACCATATTGAAACATATGATGTGACCACTGTTAGAGCCAGCACTCCAATGTTTCTAATGACTCGAAAAATTAAATCCTTGGGTGTAAAGATGGTTCTTTCGGGGGAAGGGTCGGATGAAATTTTCGGAGGTTACTTGTATTTCCATAAGGCACCTAACAAGGAGGAGTTTCATCAAGAAACATGTCGAAAGATCAAAGCTCTTCATCTATATGATTGCCTGAGGGCTAACAAATCAACATCAGCTTGGGGTGTAGAAGCTCGTGTACCCTTTCTGGACAAAGAATTCATCAATATTGCGATGGACATTGATCCAGAGTGGAAAATGATAAGACCTGATCTTGGTCGGATTGAGAAGTGGGTCCTACGCAACGCATTTGATGATGATCAGAACCCATATCTGCCGAAGCACATATTGTACAGGCAGAAGGAACAGTTCAGTGATGGAGTTGGGTACAGCTGGATTGATGGATTGAAAGCCCATGCAAATGAACATGTTTCTGATTCAATGTTGGCGCATGCAAGCTTTGTTTACCCAGAGAATACTCCGACGACGAAAGAGGGATACTACTATAGGACAATCTTTGAGAAGTTCTTCCCCAAGAATGCTGCGAGGTCAACAGTTCCAGGAGGTCCGAGCGTGGCATGCAGTACAGCTAAAGCATTGGAATGGGATGCAGCATGGTCGAAAAATCCTGATCCATCTGGTCGTGCTGCTCTTGGTGTTCATGCTTCTGCCTATGAGGAAGCAGTGGAATCAATTCCAGCCGCAAAAAAGGCCAGTTCGTTGGTTGGCCTTCCTCAGAAATTGCAGGATGGCATTTTAGAGGCTACTGCAACTACTGTTTGA 1770 0.4497 MCGILAVFGCIDNSQAKRSRIIELSRRLRHRGPDWSGLHCYENCYLSHQRLAIVDPTSGDQPLYNEDKTIVVTVNGEIYNHEALRAKLSSHQFRTGSDCEVIAHLYEEYGEDFVDMLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSTWFASEMKALSDDCERFMSFLPGHIYSSKRGELRRWYNPPWFSERIPSTPYDPLVLRETFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLAGSKVARQWGSQLHTFCIGLKGSPDLKAAREVADYLGTHHLEFHFTVQEGLDALEEVIYHIETYDVTTVRASTPMFLMTRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINIAMDIDPEWKMIRPDLGRIEKWVLRNAFDDDQNPYLPKHILYRQKEQFSDGVGYSWIDGLKAHANEHVSDSMLAHASFVYPENTPTTKEGYYYRTIFEKFFPKNAARSTVPGGPSVACSTAKALEWDAAWSKNPDPSGRAALGVHASAYEEAVESIPAAKKASSLVGLPQKLQDGILEATATTV* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01403 589 Pfam Asparagine synthase 210 361 IPR001962 GO:0004066|GO:0006529
Eupl03g01403 589 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Eupl03g01403 589 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Eupl03g01403 589 FunFam Asparagine synthetase [glutamine-hydrolyzing] 195 514 - -
Eupl03g01403 589 NCBIfam asparagine synthase (glutamine-hydrolyzing) 2 366 IPR006426 GO:0004066|GO:0006529
Eupl03g01403 589 PIRSF Asn_synthetase_glu-h 1 361 IPR006426 GO:0004066|GO:0006529
Eupl03g01403 589 PIRSF Asn_synthetase_glu-h 356 516 IPR006426 GO:0004066|GO:0006529
Eupl03g01403 589 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Eupl03g01403 589 FunFam Asparagine synthetase [glutamine-hydrolyzing] 2 192 - -
Eupl03g01403 589 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Eupl03g01403 589 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Eupl03g01403 589 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 203 485 - -
Eupl03g01403 589 Gene3D HUPs 195 514 IPR014729 -
Eupl03g01403 589 PANTHER ASPARAGINE SYNTHETASE 1 555 - -
Eupl03g01403 589 CDD AsnB 2 192 IPR033738 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01403 Eupl-Chr3 40065547 40082811 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01403 69 164 PRT Gene Family AT2G16570 37.736 7.98e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01403 K01953 - ming:122062293 1102.81