Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01400 ATGGAGTCTACGGTCTCAACAACAAACCTTTTCACCTTTTCCAAAGCCCTAAATTCGTCTCCAAAACCACTCATCTCTCGCCTCCATCGCCATTTCGCCAAATCTCCTTTGAGGCAAAGCCTTCAAAAGCGATTCTTGACTGGTAGAATCAGATGCATCAGCAATGGCGGTTTACATAGGTCGACTGAGTTCATTTCGGTGTCTTCTTCGGCAACTTCGCGTCGGAGTTCGTTTGTCGGGGCTCCGATTTCGGCTCGTTTGGCCTCTGTGTCGAGCTCTGCTGCTTCGTTTGCTTCCGGTGGAGGCGGCGATGGATTTACGGGCGGTGGCGGTGGCAGTGGCAGTGGCGGCGATGGTGGATCGGATGGAGGAGAAGCGAAGTCAAACACTCTTGCGGCCGAAGATCACTCGGCTTTGTCTCCTGATGTAATAATTCTCGATGTCGGAGGAATGACTTGTGGAGGATGTGCGGCCAGCGTGAAAAGAATATTAGAAAGTCAGCCACAGGTATCTTCTGCTAGTGTCAATCTTGCTACAGAGACAGCAATTGTGTGGCCTGTACCTGAAGCCAAGGTTACAGAGAACTGGCAGAAGCAATTAGGAGAGACACTTGCAAAGCATTTGACTAATTGTGGATTCAAGTCCAACCTTCGAGATTCTGAAAGATACAATTTCTTCAGAGTTTTTGAAAGAAAGATGGATGAAAAGCGTAATCGCTTAAAAGAAAGTGGTCGGGAGCTTGCTGTCTCCTGGGCTCTATGTGCTGTATGCCTTTTTGGCCATCTCTCTCACTTCCTTGGAGCTAACGCTTCATGGATCCATGCACTTCATTCCACAGGATTTCATCTATCCTTGTCTTTATTCACATTGCTTGGTCCTGGCCGCCAACTTATCTTTCATGGTCTGAAAAGCTTGTTGAAGGGGGCTCCAAACATGAACACCTTAGTTGGTCTTGGGGCTTTATCATCTTTTGCTGTTAGCACCATAGCTGCTTTAATACCAAAACTGGGTTGGAAGGCATTCTTTGAAGAACCAATTATGTTAATCGCATTTGTCTTGTTAGGGAGAAATCTTGAACAGAGGGCAAAGTTGAAAGCCACCAGTGATATGACAGGACTTCTGAGTATTCTACCATCAAAAGCTCGTCTTATGGTGAATGGCAATGCAGATGAGTCGAGCTCCATTGTTGAAGTTCCATGCAACAGCCTCTCTGTTGGAGACCAAATTGTTGTAGTACCTGGAGACCGTGTCCCAGCAGATGGAATTGTCAGAGCTGGTAGAAGCACGGTTGACGAATCAAGTTTTACAGGGGAGCCGCTGCCAGTAACAAAACTGCCTGGGGCTGAAGTTGCAGCAGGAAGCATAAACTTAAATGGCAGTCTTATTGTTGAAGTAAGAAGACCAGGTGGTGAGACTGTCATGGGAGATATTGTTCGTTTGGTGGAAGAAGCGCAGAGTAGGGAAGCTCCTGTACAACGGTTGGCTGACAAGGTTGCTGGGCACTTCACATATGGAGTCATGGCACTCTCGGCTGCTACTTTTATGTTTTGGAACCTGTTTGGCACTCAAATTCTACCAGCCACTTTACACCAAGGAAGTCCAATTTCATTGGCGTTACAACTCTCTTGCAGTGTTTTGGTTGTTGCATGTCCATGTGCACTTGGCCTAGCGACGCCTACTGCTGTGTTGGTTGGAACGTCACTTGGGGCAACAAGAGGACTACTTCTGCGTGGTGGGAATATCTTGGAGAAGTTTGCTTCAGTGAACACAATTGTATTCGACAAAACAGGGACCTTGACAAGTGGAAGACCTGTCGTGACCAAAGTTGTGACTCCTAGATATCAGGAAGATGCAAATTCAGTGTTGAGTGCGGATAGCAATATTCACCATTCTAATCAATTTTTGGAAAGACAACATTCAATCCACAAACCGTCAGAAGTTGAGGTTCTGAGGCTAGCTGCTGGAGTTGAATCAAATACAATTCATCCAGTTGGAAAAGCTATAGTGGAAGCTGCTCAGGCTGCAGGTTGTAAGAATGCGAAGGTAGCAGATGGAACATTTAGGGAGGAACCTGGGTCTGGTGCTGTTGCAACGATTGAGCATAAAAAGGTTTCTGTTGGGACATTGGACTGGGTTCAAAGGCATGGAGTTGATGAGATCCCATTCATAGAAGTGGAAGAGTTTAAGAATCAATCTGTCGCGTATGTAGGAGTAGATGGTGTTTTAGCAGGTCTTATTTATTTCGAAGACAAGATTAGAGAAGATGCCGGTAGTGTGGTTGAATCTCTGTCTAAGCAAGGGATAAGCATATACATGCTTTCTGGGGACAAAAAGCATGCTGCTGAATATGTAGCATCTGTTGTTGGTATTCCCAAAGAGAATGTGCTATCTGGAGTCAAACCAGATGAGAAGAAGCAGTTCATTAGCAAACTTCAGAAGGATCAGAGAGTTGTAGCCATGGTTGGTGATGGAATTAATGATGCTGCTGCCTTGGCTTCATCAGACATTGGAGTTGCCATGGGTGGAGGTGTTGGAGCTGCCAGTGAGGTGTCTTCTATTGTGCTCATGGGAAACAGACTTTCACAGGTGCTTGATGCTTTGGAACTGAGCAGACTGACCATGAAGACTGTGAAGCAAAATCTCTGGTGGGCATTTGCGTATAACATTGTTGGACTTCCAATTGCCGCTGGATTGTTGCTGCCGGTGACTGGGACTATGCTGACTCCATCAATCGCTGGAGCTCTCATGGGCTTCAGTTCAATAGGAGTAATGACAAATTCACTGCTTCTAAGGCTCAAGTTTGCCTCAAAACAGAACCCCATCTACAAACTGTCTCCGGAGACGAAAATCAGCTCCAAGTCTGATCATCTCATGGACCAAAACAGCAAATTGGAGCCCTCTTACACTGGTGCTAAATAA 2919 0.4604 MESTVSTTNLFTFSKALNSSPKPLISRLHRHFAKSPLRQSLQKRFLTGRIRCISNGGLHRSTEFISVSSSATSRRSSFVGAPISARLASVSSSAASFASGGGGDGFTGGGGGSGSGGDGGSDGGEAKSNTLAAEDHSALSPDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLATETAIVWPVPEAKVTENWQKQLGETLAKHLTNCGFKSNLRDSERYNFFRVFERKMDEKRNRLKESGRELAVSWALCAVCLFGHLSHFLGANASWIHALHSTGFHLSLSLFTLLGPGRQLIFHGLKSLLKGAPNMNTLVGLGALSSFAVSTIAALIPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKLKATSDMTGLLSILPSKARLMVNGNADESSSIVEVPCNSLSVGDQIVVVPGDRVPADGIVRAGRSTVDESSFTGEPLPVTKLPGAEVAAGSINLNGSLIVEVRRPGGETVMGDIVRLVEEAQSREAPVQRLADKVAGHFTYGVMALSAATFMFWNLFGTQILPATLHQGSPISLALQLSCSVLVVACPCALGLATPTAVLVGTSLGATRGLLLRGGNILEKFASVNTIVFDKTGTLTSGRPVVTKVVTPRYQEDANSVLSADSNIHHSNQFLERQHSIHKPSEVEVLRLAAGVESNTIHPVGKAIVEAAQAAGCKNAKVADGTFREEPGSGAVATIEHKKVSVGTLDWVQRHGVDEIPFIEVEEFKNQSVAYVGVDGVLAGLIYFEDKIREDAGSVVESLSKQGISIYMLSGDKKHAAEYVASVVGIPKENVLSGVKPDEKKQFISKLQKDQRVVAMVGDGINDAAALASSDIGVAMGGGVGAASEVSSIVLMGNRLSQVLDALELSRLTMKTVKQNLWWAFAYNIVGLPIAAGLLLPVTGTMLTPSIAGALMGFSSIGVMTNSLLLRLKFASKQNPIYKLSPETKISSKSDHLMDQNSKLEPSYTGAK* 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01400 972 SUPERFAMILY Calcium ATPase, transduction domain A 393 481 IPR008250 -
Eupl03g01400 972 NCBIfam HAD-IC family P-type ATPase 656 902 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl03g01400 972 NCBIfam HAD-IC family P-type ATPase 349 615 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl03g01400 972 MobiDBLite consensus disorder prediction 106 128 - -
Eupl03g01400 972 Gene3D - 363 485 - -
Eupl03g01400 972 SFLD p-type atpase 575 871 IPR044492 -
Eupl03g01400 972 Gene3D - 143 216 - -
Eupl03g01400 972 SUPERFAMILY HAD-like 590 927 IPR036412 -
Eupl03g01400 972 FunFam Copper-transporting ATPase PAA1, chloroplastic 142 217 - -
Eupl03g01400 972 PRINTS H+-transporting ATPase (proton pump) signature 852 877 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl03g01400 972 PRINTS H+-transporting ATPase (proton pump) signature 821 837 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl03g01400 972 CDD HMA 146 214 IPR006121 GO:0046872
Eupl03g01400 972 SUPERFAMILY Calcium ATPase, transmembrane domain M 346 894 IPR023298 -
Eupl03g01400 972 PANTHER ATP7, ISOFORM B 107 932 - -
Eupl03g01400 972 FunFam Copper-transporting ATPase PAA1 chloroplastic 737 888 - -
Eupl03g01400 972 Pfam haloacid dehalogenase-like hydrolase 588 835 - -
Eupl03g01400 972 PRINTS P-type cation-transporting ATPase superfamily signature 821 840 - -
Eupl03g01400 972 PRINTS P-type cation-transporting ATPase superfamily signature 592 606 - -
Eupl03g01400 972 PRINTS P-type cation-transporting ATPase superfamily signature 766 776 - -
Eupl03g01400 972 PRINTS P-type cation-transporting ATPase superfamily signature 744 755 - -
Eupl03g01400 972 PRINTS P-type cation-transporting ATPase superfamily signature 431 445 - -
Eupl03g01400 972 PRINTS P-type cation-transporting ATPase superfamily signature 844 856 - -
Eupl03g01400 972 ProSitePatterns E1-E2 ATPases phosphorylation site. 594 600 IPR018303 -
Eupl03g01400 972 FunFam Copper-transporting ATPase PAA1 chloroplastic 603 752 - -
Eupl03g01400 972 Gene3D - 583 871 IPR023214 -
Eupl03g01400 972 Pfam E1-E2 ATPase 376 570 - -
Eupl03g01400 972 FunFam Copper-transporting ATPase 1, putative 363 485 - -
Eupl03g01400 972 Pfam Heavy-metal-associated domain 146 213 IPR006121 GO:0046872
Eupl03g01400 972 ProSitePatterns Heavy-metal-associated domain. 148 177 IPR017969 GO:0046872
Eupl03g01400 972 ProSiteProfiles Heavy-metal-associated domain profile. 142 209 IPR006121 GO:0046872
Eupl03g01400 972 SUPERFAMILY HMA, heavy metal-associated domain 144 190 IPR036163 GO:0046872
Eupl03g01400 972 SFLD C1.7: P-type atpase like 575 871 - -
Eupl03g01400 972 Gene3D - 603 752 IPR023299 GO:0000166
Eupl03g01400 972 MobiDBLite consensus disorder prediction 951 972 - -
Eupl03g01400 972 NCBIfam heavy metal translocating P-type ATPase 312 930 IPR027256 GO:0006812|GO:0016020|GO:0019829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01400 Eupl-Chr3 39940963 40016248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01400 303 931 Primary Pumps ATPases AT1G63440 37.926 1.84e-114 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01400 K17686 - ming:122071912 1416.36