Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01378 ATGGCTCGTAACCTCTGTAACATTCTTCATGGGTTGAAGCCTGCGATGTTGATGGTGGTGGTTCAGACCGTGTTTGCTGGAGTAAATGTGTTCTATAAGTTGGCATCCAACGATGGGATGAGCATCAGGGTTTTGGTCGCTTACCGATACTTATTTGCTACGGCGTTCTTGGCTCCTATTGCTTTCTTCTTAGAAAGGAAAAGCAGGCCAAAGTTGACATGGACGGTTGTTTTCCAAGCATTTCTATGTGGGTTATTTGGGGGGGCCTTGGTTCAGAATTTTTACTTGGCGAGCTTGACTCTAACGTCTGCAACGTTTGCTTCGGCCATGATGAACCTCATTCCAGCTATTACGTTCATCATGGCTATTGCTTTTAGGTTGGAGAGGTTGGCAGTCCAAACAGTGACCGGGAAAGCTAAGATACTAGGCACGCTACTCGGCATTGGTGGTTCAATGCTCCTCACTTTCTACAAAGGCATGGTCATCAACATGTGGTCAACGAAGTTTGACATGCTGCACCATCGTGATCATCCAGGGAGCCACGTGACAGTATCACAGAATGAATCTGGTAATCGCGTACTGGGTTCATTACTGTCTTTAGGCTCCTGTTTGTCCTATGCAACCTGGTTGATCATTCAGACTAAGATGAGTGAGAGGTATCCGTGTCATTACTCTAGTACGACCATGATGTGTGGGATGGGATCAATCCAGGCCGTTGTTTTCGCCCTCTGCATGGATAGGGACTTGGCGCAGTGGAAGTTGGGTTGGAATATAAGGCTTCTCACGGTAGCTTATTCGGGAATCCTGGCATCAGGGCTGATCGTGACGTTGATTGCATGGTGTGTACATTTAAGGGGTCCACTATACGTCTCAGTTTTTGGCCCTTTGACGCTTGTGCTCGTGGCATTGGCGGGGTCCATCCTCCTTGACGAGAAGCTGCATCTTGGAAGCATATTAGGAACAGTGTTAATAGTGAGTGGGTTATACGTGGTACTGTGGGGGCAAGCAAAGGAGATGAAGAGGATGTCACAGTTGATGCCGTCGAAGAGCTCGATAGAATCGGAGGCGATAGAGGTTGTTATCACCTCCTCTGCTAATAATTACGATAATAATACCACTGACGACCAAAATGCTGATCGATCCACCGGAAATCAGTATTAG 1161 0.472 MARNLCNILHGLKPAMLMVVVQTVFAGVNVFYKLASNDGMSIRVLVAYRYLFATAFLAPIAFFLERKSRPKLTWTVVFQAFLCGLFGGALVQNFYLASLTLTSATFASAMMNLIPAITFIMAIAFRLERLAVQTVTGKAKILGTLLGIGGSMLLTFYKGMVINMWSTKFDMLHHRDHPGSHVTVSQNESGNRVLGSLLSLGSCLSYATWLIIQTKMSERYPCHYSSTTMMCGMGSIQAVVFALCMDRDLAQWKLGWNIRLLTVAYSGILASGLIVTLIAWCVHLRGPLYVSVFGPLTLVLVALAGSILLDEKLHLGSILGTVLIVSGLYVVLWGQAKEMKRMSQLMPSKSSIESEAIEVVITSSANNYDNNTTDDQNADRSTGNQY* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01378 386 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020
Eupl03g01378 386 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020
Eupl03g01378 386 MobiDBLite consensus disorder prediction 367 386 - -
Eupl03g01378 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 336 - -
Eupl03g01378 386 PANTHER WAT1-RELATED PROTEIN 13 346 IPR030184 GO:0016020|GO:0022857
Eupl03g01378 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01378 Eupl-Chr3 39530627 39533902 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01378 3 375 Nodulin-like Gene Family AT1G68170 43.651 8.77e-102 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01378 - - nnu:104600150 525.013