Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01374 ATGAAGAGCATAACTCCACGAACCATCTTTCTCTGTGCTTCTTATTCTTCATCATCTATATCACCTTCTCCATACTTCCTCTCTTCCCACTGTCTCTTCTACCGTTCAAGCCACATCAAGGAAACCCAAAATAAGAGAGGAGGAACCTTTTTTTTCTCCTCTTCTTCAATTTATCCTTCTTCTCCGTCGTGGCGACACGACGAAGAAGAAAGCCGAAACGTGAAGGTTTCAGTATGGTGGGACTTCGAAAACTGCTCCATCCCTACCGGAGTGAATGTATTCAGAGTGGGGCAGAGAATTACTTCTGCGCTTAGAGCTAATGAGATTAATGGACCTGTCGCAATCACGGCTTTCGGAGACGTCTCACAGCTCTCAAGGGCCAATCAGGAGGCCCTCTCTTCGACCGGAATCCACCTTAACCACATTCCTTGTGGTGGAAAGAATAGTGCTGACAGGTCTCTTCTTCTTGATCTTCTGTATTGGGTGTCTCAAAATCCTCCACCTGCACATCTTTTCTTAATTTCTGGGGACAGGGACTTTGCAAACATTTTACACCGGTTAAGGATGAATAACTACAATATATTGCTTGCAAGTACCGAATCTGCTCCAGGTGTTCTTTACAGTGCTGCAAGTATTATGTGGCATTGGAACGCACTGGTTAGTGGGGACTGCCTCATTGGAAAGGTTTTTAATCAACCCCCAGATGGCCCTTATGGTTCTTGGTATGGCCACTATAAGGGCCCTCTGGAGGATCCGTTCTTGGATATGGGGCAACCTGCTTGTTCACAGCCTGAGGATTCTCCTGAGCCTGGCACAGATTCTAAGCCTCGCCCAGTCCCTAAGGCTTTAGTAAATCGGATTCGTCAAATAGTGAACTCACGCCCCAAAGGAATCAGCATCGCAGAGCTTCGATCAGAGCTGGGAAAATGTAATGTGGCTATGGATAAAGACTTTTTTGGACATAAGAAGTTCTCTCGCTTGCTTATGTCACTGCCACTTGTTTTGAAGCTTCGGTTTGCAGGTGATGGCCAGATTTTGGTTCGTGGTATCCAGCCAAAAGCTGTTGAACCAGTTGAGTCCAATTTGAAATCATCCATTGCGTTGGAGACTAATAAGGCAGACAGGGACTGCACTGTAACTGCAGAATTAAATGGTTGGAATAGTGCCATGGCTGCAGATGTGATTGGGAAATCACCATTTACACCGGTGGCTTCACAAAAACCGGAAGAGTCTCCTCCACTTGGTGGTAATTTGATTGATGCCCAAACACCATTAACACCAGTGGCTCCGCGAAAACCGGAAGAGTCTCCTCCACTTGGTGGTAATTCGATTGATGCATCCACAACTGTGGGTTATTCTAGTCATATGGAGGAACATGATTCCACATCTGAAGTGGGGCTTTTTCGAAGAATATGGAGAACTTGGTTTGGGCATAAAAGTGGTGGTTGTAACGAGAAAAGTAATAATGTTCCTGTAAAATTTTCTACTATTGTCGATAGCTCTGAGAAGATAAAATCTGAGGAAAAATCTGTGGAATCAAGGAGTCATCATCCCAATCCATTAGGTTCCAGTCTGTTTTCTTCATCGGATGTGAATAAATCAGTCCTGGAAGAGAAAACTGCTATGAGTTCTGAAGAAAATGGTAATAAATCCAGCCCAAGCACGGGTTTCTTTAACCAGATTATGAACTGGTGCAGGTTTCAAAGAACTAGCACAAATGCTGATAATGCAGGTGGACAATCTGGTGAAGAGGTGAACCTGATAAATAATCAATCTGAAAATCATGAGATGTTCTCTAAGGTTTCCTTTTGGCATGAGATGGAATCATTTGTATGCACACCCGAAGGTTTGGCCCTTGTCTCCCAATCAAGGAATAGGGCAGAGATGTCGCAAAAGCTTCGAAAGGAAGGTCCTTCTGTTCTTAATATTCTTAGTACAAGTGATACCCTTCACCTCGTTGATTTATTAATATCCGAGAAGAAATGGGTGGAGGAATGCCTGTCCCAAACTTTTCCTTTTAAACTCACTCATCCAGATAGAAGGTGGTCCTCTCCATCTCATCTTCGTGGTCCAAATGGGTTGAGTTCTCTCTTTTCAGGCACATCATCTCAGTCCAAGTTGCAGAGACTACCAGATCATGAGAGGGAAAAAGGAGATCAAAACCACTCTCAAACTGGATCATGTTCGTCCAAAAGCGACAAACAACCTTCTGGCAAGTCCAGATGTGAGATACTGACCGATTGTCAGAAGCTTGTGGCAGAAATTATGGAGGAACACCCGGAAGGATTCAATATGAGCGCCTTCAAAAAATGTTTCCTCGAGAGGTACGGCTATGCTCTGGATTATCAAATGCTTGGTTACCAGAAACTGACAACTCTGTTACAGTCCATGCCAGGGGTGAGCATAGAATCTACTTTTATCCTACCTTCTGGAAAAGCAGCATTTGATTCCAGCTGGGACCATGATCGTGATTCTGCGTGGGAGGAACTTGGGCCCATCTCTGAGACGAGTTCCGACAGAAATGGCAAGGAATCAGGGTTTGATGAGAAAACTAATCAAGATATGGCAGAGCACATAGATATTGATCATAATTCTTATTTGTCCGAAGAGGAGTTTTCAGACTCGGAGGGAGAGACTTCCACCATAGATGGACCAGAAGGGCAAGGGAAGTCCAGAGAAAATGTGGAAGATAGCTCACTATTGCAGATTCTTGATTCATGGTACAGTAGTAAGGATGACAAAGATAATAAGGAAGAGTCGCAAAATGTCGATGGGCCTGTGGATTGTTCTAGAAATGACTTTAAACCTTCTGATTCGTTCGGTACTGGGTCCAATAGCATTTCCCTTGTGACAACCCGTGGACAGAAGACAAAGTCTCGTAAGAACTATTCCTTTGTTTCGGATACAGTCGAGGATGACAAGGAGAAGCTGATCGATAGTATATTGGGTAGCTTGAAGAAGTCGGCCAAGTCAAGAGTGGAGGGTTGA 2988 0.4421 MKSITPRTIFLCASYSSSSISPSPYFLSSHCLFYRSSHIKETQNKRGGTFFFSSSSIYPSSPSWRHDEEESRNVKVSVWWDFENCSIPTGVNVFRVGQRITSALRANEINGPVAITAFGDVSQLSRANQEALSSTGIHLNHIPCGGKNSADRSLLLDLLYWVSQNPPPAHLFLISGDRDFANILHRLRMNNYNILLASTESAPGVLYSAASIMWHWNALVSGDCLIGKVFNQPPDGPYGSWYGHYKGPLEDPFLDMGQPACSQPEDSPEPGTDSKPRPVPKALVNRIRQIVNSRPKGISIAELRSELGKCNVAMDKDFFGHKKFSRLLMSLPLVLKLRFAGDGQILVRGIQPKAVEPVESNLKSSIALETNKADRDCTVTAELNGWNSAMAADVIGKSPFTPVASQKPEESPPLGGNLIDAQTPLTPVAPRKPEESPPLGGNSIDASTTVGYSSHMEEHDSTSEVGLFRRIWRTWFGHKSGGCNEKSNNVPVKFSTIVDSSEKIKSEEKSVESRSHHPNPLGSSLFSSSDVNKSVLEEKTAMSSEENGNKSSPSTGFFNQIMNWCRFQRTSTNADNAGGQSGEEVNLINNQSENHEMFSKVSFWHEMESFVCTPEGLALVSQSRNRAEMSQKLRKEGPSVLNILSTSDTLHLVDLLISEKKWVEECLSQTFPFKLTHPDRRWSSPSHLRGPNGLSSLFSGTSSQSKLQRLPDHEREKGDQNHSQTGSCSSKSDKQPSGKSRCEILTDCQKLVAEIMEEHPEGFNMSAFKKCFLERYGYALDYQMLGYQKLTTLLQSMPGVSIESTFILPSGKAAFDSSWDHDRDSAWEELGPISETSSDRNGKESGFDEKTNQDMAEHIDIDHNSYLSEEEFSDSEGETSTIDGPEGQGKSRENVEDSSLLQILDSWYSSKDDKDNKEESQNVDGPVDCSRNDFKPSDSFGTGSNSISLVTTRGQKTKSRKNYSFVSDTVEDDKEKLIDSILGSLKKSAKSRVEG* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01374 995 MobiDBLite consensus disorder prediction 830 854 - -
Eupl03g01374 995 MobiDBLite consensus disorder prediction 693 739 - -
Eupl03g01374 995 MobiDBLite consensus disorder prediction 693 707 - -
Eupl03g01374 995 MobiDBLite consensus disorder prediction 441 456 - -
Eupl03g01374 995 CDD LOTUS 745 802 - -
Eupl03g01374 995 PANTHER LIMKAIN B LKAP 58 754 IPR024768 GO:0005777|GO:0010468
Eupl03g01374 995 MobiDBLite consensus disorder prediction 935 964 - -
Eupl03g01374 995 CDD LOTUS 280 348 - -
Eupl03g01374 995 Gene3D - 281 351 IPR041966 -
Eupl03g01374 995 MobiDBLite consensus disorder prediction 400 458 - -
Eupl03g01374 995 MobiDBLite consensus disorder prediction 256 279 - -
Eupl03g01374 995 MobiDBLite consensus disorder prediction 868 896 - -
Eupl03g01374 995 Pfam OST-HTH/LOTUS domain 745 804 IPR025605 -
Eupl03g01374 995 Pfam OST-HTH/LOTUS domain 284 346 IPR025605 -
Eupl03g01374 995 Gene3D - 67 217 - -
Eupl03g01374 995 ProSiteProfiles OST-type HTH domain profile. 279 351 IPR025605 -
Eupl03g01374 995 MobiDBLite consensus disorder prediction 500 529 - -
Eupl03g01374 995 MobiDBLite consensus disorder prediction 500 515 - -
Eupl03g01374 995 MobiDBLite consensus disorder prediction 908 924 - -
Eupl03g01374 995 MobiDBLite consensus disorder prediction 908 966 - -
Eupl03g01374 995 ProSiteProfiles OST-type HTH domain profile. 744 818 IPR025605 -
Eupl03g01374 995 Gene3D - 739 807 IPR041966 -
Eupl03g01374 995 Pfam NYN domain 75 210 IPR021139 GO:0004540
Eupl03g01374 995 CDD PIN_limkain_b1_N_like 75 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01374 Eupl-Chr3 39442482 39455695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01374 75 321 C2H2 Transcription Factor Family AT5G61190 38.224 2.75e-42 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01374 - - nnu:104599913 1014.22