Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01363 ATGGAGATGAGAGCCTGCGAAGACGTAGACGACATAGGCGAAGACCTCACTCCCCCAATTCTACCCATCGCTTTCTCTCTATCCGATCCATTCCTTCACTCTCATTGCTCCTCTTGCTTCCGCCCTCTAAACCCCCAATTCCCTCCGCTTCTCCCCAACAAACCCATCAATTCCCACCCTATCCCACTCGAGCCCAACTCCCATCACACCCTTCTCTACTGCTCCCCAGCCTGCTCCGACGCCGACTCCGACCGCCACTTCTCCAGCGCCGAATACCACCTTTTCCTGATCCTCCGGTCAGAATCCACCACGTGGCACGGCGACACCTCCGACCTCCGCACTGCCCTCCGCCTCCTCCTCTGCTTCCAAAAACTCGGGCTCCTCTCCCGCCAATATGAAAGAATCGGCGGTTTGATAAGTAATCGCGAGAAATTGGAAAATGAGGAGGAATACGACGAGATTCTGGCGAGAATTAGGGAAGGCGGGAGGTTGATGTCGCTCGCGAGAAGAATGAGAGATGGAGATTTTAAGGTAGGAGGAGAGAGGAGTGAAAATAATGTGGTGGAGGAGACGGTTTTATGTCAAGTGCTAACGAATGCCGTGGAGGTGCAGATTAATGAACAGCGCACCCTTGGTATAGCAGTTTACGGTCCGAGTTTCTCTTGGATCAATCATAGCTGCTCGCCCAACGCTTGTTACCGGTTTTCTTTGGTTGGGTCCGAGACACAGGATTCTGGTGAATCAAGGTTGCGGATCATCGCCTCCGGTGAAGAAGCTATATTGAAGACATGGGTTTGTGATGAAAGGAAATTGAACAATGGATTGTGTGTGTATGGTCCAAGAATTATAGTACGGAGCATCAAGCCGATTAAGAAAGGCGAGGAGGTTTGTGTTGCATACACAGATTTGTTGCAACCCAAGGCAATGAGGCACTCAGAATTATGGTTCAGGTATCGGTTTATTTGCTGCTGCAGGCGATGTAGTACTTTGCCGCTGGCTTATGTAGATCGTGTTTTGCAAGAAAATGCCACTGCCAACCTCAAGGCAACCAACTCAAGTTTGGATCACAATTTCTATAGAGATGAGCCATACAAAGAGCTAACTGATTGCCTGGATGAAACTATATCCGAGTACTTGTCTGTTGGGAATCCTGAAACTCTCTGTGAGAAGCTTGAGAACATGCTTATTCAAAGTCTCCAAGAAGAGCAGTTACAACCAGAAGAAGAACCATCATGGCCAAATTTCAAGTTGCTTCCCCTGCATCATCTCTCTCTGAATGCCTTCATAACATTGGCTTCTGCCTATAAGATCCGTGCAAGTAACTTATTGGCTCTCAATTCAGAAATGGACTATCATAGGTTGGAAGCTTTCAAGCTGAGCAGGACTAGTGCAGCGTACTCCTTGTTGCTTGCAGGTGCAACCCACAACTTGTTCCTCTCTGAATCTTCATTGATTGCCCACACTGCCAATTTCTGGATAAGTGCCGGAGAGTCCTTATTGAGTCTCGCTAGAAGCTTGATATGGAATTCCATATTATATCGGGAACTGCCTGATTTAAGCCTTTCATCTCTGCCCAGTCATAAACATGGCAAGTGCTTATTGATGGACAAATTGGAAGTCGATTTGTCTTGTAATCAATCTCGATGCATCTCAACACAAAGCGAGTTTAAGGAGATATCCAAAGGTTTTCTTGATTGTGTTTCAAGGATTTCACCAAAGGTCTGGCCTTTCTTGATTCACACCCAACGTTACTTTAAAGACATCAAGGATCCTGTTGATTTCAGCTGGCTTGGAACAACAAAGAATCCCAATATAGGGAAGTCTCGGACTCCTCCGGGCAGCACTGATGTGGGTTCTTACTATGTGAATGGAGGCAGTTGCAGCTGTAGATGTGAAGCAGATGAACACACTGACAAAGAAAGGACAAGCATCTTTCAGCTTGGCGCTCATTGCGTGCTTTACGGAGGATATCTAGCGAGCATTTGTTACTGTCGTCATGGCTATTTGACTGGTTATGTTAGAAATCTGCTCTGGGGTGGAGACATACAGAGATACCCATGA 2061 0.4702 MEMRACEDVDDIGEDLTPPILPIAFSLSDPFLHSHCSSCFRPLNPQFPPLLPNKPINSHPIPLEPNSHHTLLYCSPACSDADSDRHFSSAEYHLFLILRSESTTWHGDTSDLRTALRLLLCFQKLGLLSRQYERIGGLISNREKLENEEEYDEILARIREGGRLMSLARRMRDGDFKVGGERSENNVVEETVLCQVLTNAVEVQINEQRTLGIAVYGPSFSWINHSCSPNACYRFSLVGSETQDSGESRLRIIASGEEAILKTWVCDERKLNNGLCVYGPRIIVRSIKPIKKGEEVCVAYTDLLQPKAMRHSELWFRYRFICCCRRCSTLPLAYVDRVLQENATANLKATNSSLDHNFYRDEPYKELTDCLDETISEYLSVGNPETLCEKLENMLIQSLQEEQLQPEEEPSWPNFKLLPLHHLSLNAFITLASAYKIRASNLLALNSEMDYHRLEAFKLSRTSAAYSLLLAGATHNLFLSESSLIAHTANFWISAGESLLSLARSLIWNSILYRELPDLSLSSLPSHKHGKCLLMDKLEVDLSCNQSRCISTQSEFKEISKGFLDCVSRISPKVWPFLIHTQRYFKDIKDPVDFSWLGTTKNPNIGKSRTPPGSTDVGSYYVNGGSCSCRCEADEHTDKERTSIFQLGAHCVLYGGYLASICYCRHGYLTGYVRNLLWGGDIQRYP* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01363 686 Gene3D SET domain 22 240 IPR046341 -
Eupl03g01363 686 SUPERFAMILY SET domain 197 328 IPR046341 -
Eupl03g01363 686 CDD SET_SMYD 187 327 - -
Eupl03g01363 686 Gene3D - 105 200 - -
Eupl03g01363 686 PANTHER PROTEIN SET DOMAIN GROUP 41 1 678 - -
Eupl03g01363 686 Gene3D - 35 104 - -
Eupl03g01363 686 Pfam SET domain 201 300 IPR001214 GO:0005515
Eupl03g01363 686 Gene3D SET domain 277 327 IPR046341 -
Eupl03g01363 686 ProSiteProfiles SET domain profile. 116 301 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01363 Eupl-Chr3 39273417 39276915 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl03g01363 SET 4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01363 - - nnu:104599923 777.319