Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01349 ATGAGCTATAAAGGTCACGAGTTGCGAACACCTATGACTGCAGTGATTGGGTTGCTGGACATTCTTATACGTGATAATTTTCTGACAAACAAGGAACATACAACAGTTACACAGATTCGTAAATGCTCAACTGCTCTACTTCGGCTTCTTAATAACATTTTGGACCTTAATAAGGTGAACAACATGCTCCTCATCAGTCACAGATATTATTATTAG 216 0.3796 MSYKGHELRTPMTAVIGLLDILIRDNFLTNKEHTTVTQIRKCSTALLRLLNNILDLNKVNNMLLISHRYYY* 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01349 71 Gene3D - 1 60 - -
Eupl03g01349 71 SMART HisKA_10 1 62 IPR003661 GO:0000155|GO:0007165
Eupl03g01349 71 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 5 60 IPR036097 GO:0000155|GO:0007165
Eupl03g01349 71 CDD HisKA 6 58 IPR003661 GO:0000155|GO:0007165
Eupl03g01349 71 Pfam His Kinase A (phospho-acceptor) domain 6 59 IPR003661 GO:0000155|GO:0007165
Eupl03g01349 71 PANTHER TWO-COMPONENT HISTIDINE KINASE 6 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01349 Eupl-Chr3 39111282 39115913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01349 6 65 Histidine Kinase Gene Family AT2G17820 75.000 9.55e-25 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01349 - - sly:101265097 90.1225