Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01337 ATGGGTTGTGTTCAGGCCAAGCCGTCTACGTACTCGCCGCCTAGCAGGCTTGAGAAGATGAAGTTGGAGAATGGTTATGTTGTAAGAGGAGACAGTGGGAGACTGAAGGGTCAGAAACAGCTGGGTAAGAATTCTGATCCGTTTCGGCATGAAGGGATTAATACTAAGAAAGTGCAATTTGTGGTTGGCAGTGGCGATGGTGACGGCGAAGAGGGGAAATTGATTGGTAGAGAAGGAGAAAGGGAGGGTGGTGTTTGTGGGAATGTTTCTCAGAGGATTTCTTCAAATAGGGAGGTTGGAGGGGATGAGCTTGTTGACAGTTGGCCGAAGTGGCTTACTGATAATATTCTAGAGAAGCTCTGGTGGGTTTGGTCCTCAAGAATAGGCAAGGGAACCTACAGCAATGTGTATAAAGCTCGAGACCGAGACACTGGTAAGATTGTTGCACTGAAGAAGGTCAGGTTCAACACTTCAGAGCCCAAGAGCGTGAGATTTATGGCGCGAGAGATCATGATACTACAGAAGTTGGATCATCCTAATGTTGTAAAGCTCGAGGGACTGGCCACATCGAGAATGCAATATAGTCTTTACCTGGTTTTCGATTTCATGCAGTCGGACTTGGCAAGAATTGTTTGCCGCCCTGATGGGAGGCTCACTGAACCACAGGTCAAGTGTTATATACAGCAGCTGCTTTCAGGTCTGCAGCACTGTCATGAGAGGGGGATTTTACACCGAGACATTAAAGGATCCAACTTGTTGATTGATAAACATGGGATGCTAAAGATTGCAGATTTTGGCCTTTCGAATTTTTTCAATTCTAACCAAAAGAGGCCTCTCACGAGCCGAGTTGTGACACTCTGGTATAGAGCCCCTGAGCTGCTATTAGGTGCCACAGATTATGGTGTTGGAATCGATCTTTGGAGTGCGGGATGCCTTATGGCAGAGATGTTTTCAGGAAGGCCAATTATGCCTGGTAGGACAGAGGTCGAGCAAATTCATAAGATTTTCAAGCTGTGTGGATCACCATCAGAGGATTACTGGAAAAAACTGAAGCTGACTACAAGCTTCCGTCCACCACAACCGTACAAGCCTAGTCTTTTAGAAACCTTCAAGGACTTTCCTACCTCTGCTTTGGATCTCTTGACCATGCTTCTTGCTCTAGATCCCACATGTCGTGGCAATGCATCTTCTGCTCTCCAAAGTGAATTCTTTAGGACAAGCCCATTGGTATGCGACCTTTCAGGCCTACCTGTAATCTACAAGAAGGAGGAGGAACCAACTTACACCAATGACAATAGAAAGAACTGGACCTCAAAAATGAAACAGTGTTCTCAAACACATCATGAGGGTCAAAGCAAAAAGGATATAGCTAATGAAAAATCCAAAGGAGATTCTGCATCTTCTAAAGAGGAGCAGGAAAAGAATGCAGAGTCAATTTTCCACAGCCAAGAGATGGGTAGCAGTACAGGTAGTACTTCCTCTAGTGTGAAGCGAAGCAGGCATGAAGAGAGCTCACCTCCCTCCCCTTTCCTTGTTGTACATTCTCACGGAAAGAGATCGCCGAGAACGGAAGGCCATCCTAATGCTACCAAGAACATTAAAAACCTGCCTCCTTTACCCACCACCAAAACAAGCACCACTAACTACAATGAAGACAGCGATAACATGTACAGTTTGAGTCTGGCTCACAGGTCTGTCTCCACGAGAGATTTCCGGATATTGGAAAGACAAACGTTTTCTATACATTACGCTTTCGATTATTAG 1764 0.4546 MGCVQAKPSTYSPPSRLEKMKLENGYVVRGDSGRLKGQKQLGKNSDPFRHEGINTKKVQFVVGSGDGDGEEGKLIGREGEREGGVCGNVSQRISSNREVGGDELVDSWPKWLTDNILEKLWWVWSSRIGKGTYSNVYKARDRDTGKIVALKKVRFNTSEPKSVRFMAREIMILQKLDHPNVVKLEGLATSRMQYSLYLVFDFMQSDLARIVCRPDGRLTEPQVKCYIQQLLSGLQHCHERGILHRDIKGSNLLIDKHGMLKIADFGLSNFFNSNQKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLMAEMFSGRPIMPGRTEVEQIHKIFKLCGSPSEDYWKKLKLTTSFRPPQPYKPSLLETFKDFPTSALDLLTMLLALDPTCRGNASSALQSEFFRTSPLVCDLSGLPVIYKKEEEPTYTNDNRKNWTSKMKQCSQTHHEGQSKKDIANEKSKGDSASSKEEQEKNAESIFHSQEMGSSTGSTSSSVKRSRHEESSPPSPFLVVHSHGKRSPRTEGHPNATKNIKNLPPLPTTKTSTTNYNEDSDNMYSLSLAHRSVSTRDFRILERQTFSIHYAFDY* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01337 587 MobiDBLite consensus disorder prediction 479 495 - -
Eupl03g01337 587 SMART serkin_6 122 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01337 587 MobiDBLite consensus disorder prediction 446 478 - -
Eupl03g01337 587 SUPERFAMILY Protein kinase-like (PK-like) 122 409 IPR011009 -
Eupl03g01337 587 FunFam probable serine/threonine-protein kinase At1g54610 118 204 - -
Eupl03g01337 587 MobiDBLite consensus disorder prediction 526 551 - -
Eupl03g01337 587 Pfam Protein kinase domain 126 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01337 587 MobiDBLite consensus disorder prediction 431 445 - -
Eupl03g01337 587 Gene3D Transferase(Phosphotransferase) domain 1 205 460 - -
Eupl03g01337 587 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Eupl03g01337 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Eupl03g01337 587 FunFam Putative serine/threonine-protein kinase 205 442 - -
Eupl03g01337 587 Gene3D Phosphorylase Kinase; domain 1 122 204 - -
Eupl03g01337 587 MobiDBLite consensus disorder prediction 428 551 - -
Eupl03g01337 587 ProSiteProfiles Protein kinase domain profile. 122 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01337 587 PANTHER CELL DIVISION PROTEIN KINASE 126 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01337 Eupl-Chr3 38845566 38851603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01337 117 424 Core Cell Cycle Gene Families AT5G10270 45.373 4.09e-94 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Eupl03g01337 Pkinase 2.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01337 K08819 - msin:131228730 672.159