Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01325 ATGTCGTCGTCTTCCCAAGTGATGCTAAACCAGGGGTTATTGGAGGATCAAGAGATTTCAGCTCACATGGGTTTCTACGCACACGGGTCTTCTCCTCCTCCTAACTGGACCTTTCCTCCATATGGGTTTCATCAATCTATAAGAACTTCTATGGGAATTACAGATCTTACTTCTCATCTCACTGCAGAAACCCTCTCTTCCACTACTGCTCCAAAGCACAGAGATCTTGCTGACTTCGTCGTTGCTCCTTCACTGCAGAGATCCACTGCTAATTTATGGCCGTGGGGAGAAGTGGATGGGTGTTTAGGGATGAGTAGGAGATGTGTTGGAAATGGAAATGATCATCATCATCTGGGAGTTGCTGCAATGAAGATGAAGAAAGTGAAATCAAGGAGGAAGATTAGAGAACCCAGGTTTTGCTTCAAGACCATGAGCGACGTGGATGTGTTAGACGATGGTTACAAGTGGAGGAAGTACGGCCAGAAAGTGGTGAAGAATACACAGCATCCAAGGAGTTACTACCGTTGTACACAAGACAATTGCCGCGTGAAGAAACGGGTGGAGCGATTAGCGGAGGATCCACGGATGGTGATCACGACATATGAAGGAAGACATGCACATTCTCCATCACATGATCTGGATAACTCCCAAACTCAGTCGCAGATTAGCAATTTCTTCTGGTAG 684 0.462 MSSSSQVMLNQGLLEDQEISAHMGFYAHGSSPPPNWTFPPYGFHQSIRTSMGITDLTSHLTAETLSSTTAPKHRDLADFVVAPSLQRSTANLWPWGEVDGCLGMSRRCVGNGNDHHHLGVAAMKMKKVKSRRKIREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSHDLDNSQTQSQISNFFW* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01325 227 MobiDBLite consensus disorder prediction 212 227 - -
Eupl03g01325 227 SMART WRKY_cls 150 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl03g01325 227 SUPERFAMILY WRKY DNA-binding domain 142 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl03g01325 227 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 117 212 IPR044810 GO:0003700
Eupl03g01325 227 Pfam WRKY DNA -binding domain 151 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl03g01325 227 Gene3D WRKY domain 136 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl03g01325 227 ProSiteProfiles WRKY domain profile. 145 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl03g01325 227 FunFam WRKY transcription factor 57 136 210 - -
Eupl03g01325 227 MobiDBLite consensus disorder prediction 204 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01325 Eupl-Chr3 38675555 38678467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01325 120 227 WRKY Transcription Factor Family AT4G39410 76.991 9.82e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl03g01325 WRKY 5.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01325 - - ming:122073555 305.064