Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01324 ATGGAGCAAGAGAGCCAGAAAAGGGAAGTCGAGGAGGCTGGTTGCCAAACTCCGAATTCTCCAATCCTCTGCGCGAATAACTGTGGATTCTTCGGAACTACGGCAACCAAAAATCTTTGCTCGAAATGCTACAGAGATTTATTTCTGAAGCAATCCAAGGCTTCTGCTGTCACAGTGATTGCTGAGACGAAGACTGATGAACCCATCACAGAAACAATAGATCAGGTCGGAGTGGGTGAAGAAGCTAAAGCTACTCAGCCTACTCCTAGTGAGGAAGGGACAACTTCTGAAGATCCGGTGAAAAGACCTGCCAACCGTTGTGGCTTCTGTAGGAAGCGTGTTGGACTGACCGGCTTCAAGTGCCGATGTGAGCAGACGTTTTGTTCTCTGCATCGCTACTCCGACGAGCACAACTGCCTGTTTGATTACAAAACTGCTGCCCAGGATGCAATTGCCAAAGCAAATCCTGTTGTGAAGGCCGACAAGATTGAGAAGATCTAA 501 0.481 MEQESQKREVEEAGCQTPNSPILCANNCGFFGTTATKNLCSKCYRDLFLKQSKASAVTVIAETKTDEPITETIDQVGVGEEAKATQPTPSEEGTTSEDPVKRPANRCGFCRKRVGLTGFKCRCEQTFCSLHRYSDEHNCLFDYKTAAQDAIAKANPVVKADKIEKI* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01324 166 Pfam AN1-like Zinc finger 107 144 IPR000058 GO:0008270
Eupl03g01324 166 SUPERFAMILY AN1-like Zinc finger 91 161 IPR035896 -
Eupl03g01324 166 PANTHER AN1-TYPE ZINC FINGER PROTEIN 21 166 - -
Eupl03g01324 166 ProSiteProfiles Zinc finger A20-type profile. 18 52 IPR002653 GO:0003677|GO:0008270
Eupl03g01324 166 FunFam Zinc finger AN1-type containing 6 80 162 - -
Eupl03g01324 166 Gene3D - 80 162 IPR035896 -
Eupl03g01324 166 SMART AN1_Zf_4 107 144 IPR000058 GO:0008270
Eupl03g01324 166 Pfam A20-like zinc finger 22 45 IPR002653 GO:0003677|GO:0008270
Eupl03g01324 166 MobiDBLite consensus disorder prediction 77 101 - -
Eupl03g01324 166 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 23 62 - -
Eupl03g01324 166 SMART A20_3 21 45 IPR002653 GO:0003677|GO:0008270
Eupl03g01324 166 Gene3D - 1 68 - -
Eupl03g01324 166 ProSiteProfiles Zinc finger AN1-type profile. 101 147 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01324 Eupl-Chr3 38652000 38653651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01324 11 166 C2H2 Transcription Factor Family AT3G52800 45.562 3.60e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01324 - - nnu:104605500 276.944