Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01296 ATGGGGCTCTGTAACTCGAAACCCTCCCCCGGACCAAATATTTACTCCCCCAGAGAAGAACTAGAGGAAAACTCTAAACCTTCTGCATCTCCTGTTAATGGCGGAGGCGAGAATCATCATCAGCAGCAGGAGCAACATCGTCAACAACAGCAGAAAGAGGAGGCGGAGGCCGTAAAGCGGTCGCCATTCTTCCCTTTTTACAGTCCAAGTCCAGCTCACTACTTGTTTTCCAAGAAATCTCCTGCTCCGAGTTCGAACTCTACGCCGCGGAGGTTCTTTAAGCGGCCTTTCCCACCGCCATCACCGGCCAAGCACATCCGCGCAGTGTTGGCGAGACGGCATGGATTGGTGAAGCCGAATGAGACTGCGATACCAGAGGGGAATGAGGCTGAGACTGTTGCGGGGCTCGATAAGAGCTTTGGGTTTTCGAAGCACTTTGTGAACAAATATGAGCTTGGAGATGAGGTTGGGCGTGGGCATTTTGGGTATACCTGTGCCGCCAAGTTTAAGAAAGGTGAGCTCAAGGGTCAACAGGTTGCTGTTAAGGTCATCCCCAAAGCGAAGATGACTACAGCCATTGCTATTGAGGATGTGAGAAGGGAGGTGAAAATATTAAGAGCATTGACAGGACATAACAATCTAGTGCAATTCTATGATGCATACGAAGACCACGACAATGTCTATATAGTAATGGAGTTATGCGAAGGAGGCGAGCTTTTAGATAGAATACTTTCAAGGGGTGGGAAATACACAGAAGATGATGCAAAGGCTGTCATGGTACAAATATTGAACGTGGTCGCATTTTGCCATCTTCAGGGTGTGGTACACAGGGATCTTAAACCAGAGAATTTCCTGTTTACTTCAAAGGATGAAAACTCACAATTGAAGGCAATAGACTTTGGCTTGTCGGATTTTGTCAAACCAGATGAAAGGCTTAATGACATTGTAGGAAGTGCATACTATGTAGCACCTGAAGTTCTACATAGATCTTACAGTACAGAGGCTGATGTATGGAGTATTGGTGTGATAGCTTATATACTTCTATGTGGGAGTCGTCCATTTTGGGCCCGAACTGAATCTGGAATCTTTCGGGCAGTTTTAAAAGCTGACCCAAGTTTCGATGAACCACCTTGGCCTTCTCTATCTTCTGAGGCAAAGGATTTTGTCAAACGTCTACTAAATAAAGACCCACGCAAAAGAATGTCTGCTGCTCAGGCTCTAAGTAAGTGCTCTCGTCCCCTGTCAAAAATGCTGGATTTCTGGTGTTATAAAATTAGTGCAAATAATCTTCTGTGTGTAGGTCATCCTTGGATTAGAAATTATAACGATGTAAAAGTGCCTCTGGACATTCTAACATTCAGACTCATGAAGGCGTATATGCGTTCATCATCTCTGCGTAAGGCTGCTTTGAGGGCTCTGTCTAAAACATTGACTGTGGATGAGCTCTTTTATCTGAAGGAGCAGTTTGCACTATTGGAGCCAAATAAAAATGGCAGCATAAACTTGGAGAATATCAGGACGGCCTTGATGAAAATGGCTACAGATGCAATGAAGGAGTCCCGTGTTACTGATTTTCTTGGCTCGCTAAGTTCACTTCAGTACAGAAGGATGGATTTTGAAGAATTCTGCACGGCAGCTTTAAGTGTCCATCAACTTGAAGCACTCGATCGGTGGGAACAACATGCTCGTTGTGCCTATGAACTTTTTGAAAAGGATGGGAACAGAGCTATTGTCATTGAAGAACTTGCTTCAGAACTTGGGCTTAGCCCTTCAGTCCCAGTCCATGCTGTTCTTCACGACTGGATAAGGCACACTGATGGGAAGCTGAGCTTCCTTGGATTCGTCAAATTGTTGCATGGTGTGTCCAGCCGAACCCTAGCGAAGGCTCAATAA 1893 0.4532 MGLCNSKPSPGPNIYSPREELEENSKPSASPVNGGGENHHQQQEQHRQQQQKEEAEAVKRSPFFPFYSPSPAHYLFSKKSPAPSSNSTPRRFFKRPFPPPSPAKHIRAVLARRHGLVKPNETAIPEGNEAETVAGLDKSFGFSKHFVNKYELGDEVGRGHFGYTCAAKFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHNNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEDDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSQLKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSSEAKDFVKRLLNKDPRKRMSAAQALSKCSRPLSKMLDFWCYKISANNLLCVGHPWIRNYNDVKVPLDILTFRLMKAYMRSSSLRKAALRALSKTLTVDELFYLKEQFALLEPNKNGSINLENIRTALMKMATDAMKESRVTDFLGSLSSLQYRRMDFEEFCTAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLSPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGVSSRTLAKAQ* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01296 630 SMART serkin_6 150 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01296 630 Gene3D Phosphorylase Kinase; domain 1 143 239 - -
Eupl03g01296 630 Pfam Protein kinase domain 150 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01296 630 FunFam Calcium-dependent protein kinase SK5 322 412 - -
Eupl03g01296 630 FunFam CDPK-related kinase 3 142 314 - -
Eupl03g01296 630 MobiDBLite consensus disorder prediction 40 59 - -
Eupl03g01296 630 PANTHER SERINE/THREONINE-PROTEIN KINASE 134 604 - -
Eupl03g01296 630 MobiDBLite consensus disorder prediction 1 61 - -
Eupl03g01296 630 ProSiteProfiles Protein kinase domain profile. 150 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01296 630 SUPERFAMILY Protein kinase-like (PK-like) 146 408 IPR011009 -
Eupl03g01296 630 SUPERFAMILY EF-hand 466 620 IPR011992 -
Eupl03g01296 630 ProSiteProfiles EF-hand calcium-binding domain profile. 480 515 IPR002048 GO:0005509
Eupl03g01296 630 Gene3D - 457 620 - -
Eupl03g01296 630 FunFam CDPK-related kinase 1 474 547 - -
Eupl03g01296 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Eupl03g01296 630 CDD STKc_CAMK 149 408 - -
Eupl03g01296 630 Gene3D Transferase(Phosphotransferase) domain 1 240 420 - -
Eupl03g01296 630 ProSitePatterns Protein kinases ATP-binding region signature. 156 182 IPR017441 GO:0005524
Eupl03g01296 630 FunFam CDPK-related kinase 1 143 238 - -
Eupl03g01296 630 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01296 Eupl-Chr3 38182164 38194180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01296 1 626 EF-hand Containing Proteins AT3G50530 73.906 0.0 978
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Eupl03g01296 Pkinase 1.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01296 K13412 - nnu:104605588 1048.5