Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01286 ATGACGAACACAGCATTCTTCACGACGTTGCTGCTTCTCTCATGCTTTGCGAGTTCTGTTCAATGTTACGGAAGGAGTGGATTCGACCCATTACATAAATTCATGAGGGAAGACTTGTTGAAGGGCGTAGTTGATACTGGATTATTCGGTACGACTACGGAGTATTCACCTGTGTACGTGGGCCCTCAAGATGGGTTGAAGGATTCTGATAAGATCGAGAGCTTGCCAGGGCAACCTGATGGAGTGAACTTCGATCAGTACTCAGGCTACGTGACTGTAGATGCCCACAATGGAAGAGCACTTTTCTATTATTTTGTTCAGTCTCCTCAAAATTCTTCAACAAACCCCCTCGTCTTATGGCTTAATGGAGGACCTGGCTGTTCTTCATTTGGATATGGAGCAATGATGGAATTAGGGCCATTTAGAGTCAAGAGTGATGGACAAACTCTATACCGAAATGACTCCGCATGGAACAACGTGGCCAATGTCCTCTTCCTCGAATCTCCGGCTGGAGTCGGATTTTCTTACTCGAATACGACGTCTGACTACGACTTAAGTGGGGATAAGAGGACTGCTGAAGATTCATACACTTTTTTGGTTAACTGGTTGGAAAGGTTCCCTGAATACAAGACCAGGGATTTCTTTATAGCAGGGGAGAGCTACGCAGGGCATTATGTCCCTCAGCTCGCCTACTTGATCCTTCAAAATAACAAGAATTCCAATCAAACGGTCATTAACCTACGAGGAATCGCGATAGGTAATGGATTGCTCGACTATGAAACGCGTTATAAGGGGAAGTACGACTTCTTTTGGTCGCATGCACTCATTTCTGACGAAATCAACGAGGGTATTAGCTTAAACTGCAATTTTTCATCACCATATACTGTATCGGAAGTATGCAGAGGGTATCTTAGCCAAGTAGATATCGGCAACATCTTCATCTATGACATCTATGCCCCCTTATGCACTTCCCCTTCAAACAGCACCTCTATTACAGCATTCGATCCCTGCTCGGATGATTACATCTACTCTTATTTAAACATCCCCAAGTGCAAAAAGCTCTTCATGCGAACGTCACTGCGCTTCCATATCCATGGGAGTCTTGCACGTACTAGCCAGATAAATAGTTGGAACGACTCGCCATTAACGATTTTGCCAATCATTCAAGAGCTCATGGCCAGTGATATTAGTGTGTGGATATATAGCGGGGACACGGATGGTATACTACCTGTAACAACCAGTAGGTACGCCATTAACAGCCTCGGTACACCAGTTAAGACACAATGGTACCCTTGGTACACTGAAGGCGAGGTCGGTGGGTATGCCGTTGGATACCAAAATCTGACATTTGTGACCATAAGAGGAGCTGGACATTTTGTTCCAATAATCACAAATAACCCTAAGATAGCCATGACGAAGGCAGCATTTTTCATCATGACACTCCTTCTCTCGTGCCTTGCGAGTTTTGTTCAATCTTACGGAGGGAGTGGATTCGACCCATTAGGTAAGTTCATGAGGGAAGAATTGTTGAAGAAGGGAGTAGTTGATACGTCGACGGTGGAGATCAGTTCTATGACTACGGAGTATTCACCTGTGTACGTGGGCCCTCAAGATGGGTTGAAGGATTCTGATAAGATCGAGGGCTTGCCAGGGCAACCTGATGGAGTGAACTTCGATCAGTACTCAGGCTACGTGACTGTAGATGCTCACAATGGAAGAGCACTTTTTTACTATTTTGTTCAGTCTCCTCAAAACTCTTCAACAAACCCCCTCGTCTTATGGCTTAATGGAGGACCTGGCTGTTCTTCATTTGGAAATGGAGCAATGATGGAATTAGGGCCATTTAGAGTCACGAGTGATGGACAAACTCTATACCGAAATGAGTTCGCATGGAACAACGTGGCTAATATCATCTTCCTCGAATCCCCGGCTGGGGTCGGATTTTCTTACTCGAATACGACGTCGGACTACGACTTAAGTGGGGATAAGAGGACTGCTGAAGATTCATACACTTTTTTGGTTAACTGGTTGGAAAGGTTCCCTGAATACAAGACCAGGGATTTCTTTATAGCAGGTGAGAGCTATGCAGGGCATTATGTTCCTCAGCTCGCTCAGTTGATCCTTCAAAATAACAAGAACTCAAATCAAACCGTCATTAACCTACGAGGAATTGCAATAGGTAATGCATGGATCGACTTTGAAACGGGTTATAAGGGGATGCTCGACTACTTTTGGACGCATGCTCTCATTTCTGACGAAATCAATGAGGGTATTAGCTTAAACTGCAATTTTTCTTCGCCGGACGCTGTATCGAAAGTATGCATAGAATATCTTGACCAAGTGGATATCGGCAACATCTTCATCTATGACATCTATGCCCCCTTATGTGCTTCCCCTTCAAACGGCACCTTCTCTTCAAGCAGCACCTCTATTACAGCATTCGATCCCTGCTCGGACGATTATATCTACTCTTATTTGAACATTCCCCTAGTGCAGAAAGCTCTTCATGCGAACGTTACGGCACTTCCATATCCATGGGATAGCCAGATAAATGGTTGGAACGACTCGCCATTAACGATTTTGCCAATAATTAAGGAGCTCATGGCCAGTGATATTAGCGTGTGGATATATAGCGGGGACACGGATGGAAGAGTACCAGTAACAAGCAGTAGGTACGCCATTAACAACCTCGGGACACCAGTTAAGACGCAATGGTACCCTTGGTACACTCAAGAAGAGGTCGGTGGTTACGCTGTTGAATACCAAAACCTGACATTTGTGACCATAAGAGGAGCTGGACATTTTGTTCCAAGTTATCAACCAGCTAGGGCTCTCACCTTCTTCTCGTCCTTCTTAGACGGCAAGCTTCCACCTTCATCTTAG 2883 0.4492 MTNTAFFTTLLLLSCFASSVQCYGRSGFDPLHKFMREDLLKGVVDTGLFGTTTEYSPVYVGPQDGLKDSDKIESLPGQPDGVNFDQYSGYVTVDAHNGRALFYYFVQSPQNSSTNPLVLWLNGGPGCSSFGYGAMMELGPFRVKSDGQTLYRNDSAWNNVANVLFLESPAGVGFSYSNTTSDYDLSGDKRTAEDSYTFLVNWLERFPEYKTRDFFIAGESYAGHYVPQLAYLILQNNKNSNQTVINLRGIAIGNGLLDYETRYKGKYDFFWSHALISDEINEGISLNCNFSSPYTVSEVCRGYLSQVDIGNIFIYDIYAPLCTSPSNSTSITAFDPCSDDYIYSYLNIPKCKKLFMRTSLRFHIHGSLARTSQINSWNDSPLTILPIIQELMASDISVWIYSGDTDGILPVTTSRYAINSLGTPVKTQWYPWYTEGEVGGYAVGYQNLTFVTIRGAGHFVPIITNNPKIAMTKAAFFIMTLLLSCLASFVQSYGGSGFDPLGKFMREELLKKGVVDTSTVEISSMTTEYSPVYVGPQDGLKDSDKIEGLPGQPDGVNFDQYSGYVTVDAHNGRALFYYFVQSPQNSSTNPLVLWLNGGPGCSSFGNGAMMELGPFRVTSDGQTLYRNEFAWNNVANIIFLESPAGVGFSYSNTTSDYDLSGDKRTAEDSYTFLVNWLERFPEYKTRDFFIAGESYAGHYVPQLAQLILQNNKNSNQTVINLRGIAIGNAWIDFETGYKGMLDYFWTHALISDEINEGISLNCNFSSPDAVSKVCIEYLDQVDIGNIFIYDIYAPLCASPSNGTFSSSSTSITAFDPCSDDYIYSYLNIPLVQKALHANVTALPYPWDSQINGWNDSPLTILPIIKELMASDISVWIYSGDTDGRVPVTSSRYAINNLGTPVKTQWYPWYTQEEVGGYAVEYQNLTFVTIRGAGHFVPSYQPARALTFFSSFLDGKLPPSS* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01286 960 PRINTS Carboxypeptidase C serine protease (S10) family signature 676 701 IPR001563 GO:0004185|GO:0006508
Eupl03g01286 960 PRINTS Carboxypeptidase C serine protease (S10) family signature 627 639 IPR001563 GO:0004185|GO:0006508
Eupl03g01286 960 PRINTS Carboxypeptidase C serine protease (S10) family signature 640 650 IPR001563 GO:0004185|GO:0006508
Eupl03g01286 960 PRINTS Carboxypeptidase C serine protease (S10) family signature 924 937 IPR001563 GO:0004185|GO:0006508
Eupl03g01286 960 FunFam Carboxypeptidase 539 806 - -
Eupl03g01286 960 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 545 941 IPR001563 GO:0004185|GO:0006508
Eupl03g01286 960 SUPERFAMILY alpha/beta-Hydrolases 68 470 IPR029058 -
Eupl03g01286 960 Gene3D - 817 848 - -
Eupl03g01286 960 FunFam Carboxypeptidase 65 332 - -
Eupl03g01286 960 Gene3D alpha/beta hydrolase 65 478 IPR029058 -
Eupl03g01286 960 Gene3D - 860 954 - -
Eupl03g01286 960 FunFam Carboxypeptidase 860 954 - -
Eupl03g01286 960 SUPERFAMILY alpha/beta-Hydrolases 542 956 IPR029058 -
Eupl03g01286 960 Pfam Serine carboxypeptidase 76 473 IPR001563 GO:0004185|GO:0006508
Eupl03g01286 960 Pfam Serine carboxypeptidase 550 954 IPR001563 GO:0004185|GO:0006508
Eupl03g01286 960 ProSitePatterns Serine carboxypeptidases, serine active site. 690 697 IPR018202 GO:0004185
Eupl03g01286 960 ProSitePatterns Serine carboxypeptidases, histidine active site. 924 941 IPR033124 GO:0004185
Eupl03g01286 960 Gene3D alpha/beta hydrolase 539 806 IPR029058 -
Eupl03g01286 960 FunFam Carboxypeptidase 384 479 - -
Eupl03g01286 960 ProSitePatterns Serine carboxypeptidases, serine active site. 216 223 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01286 Eupl-Chr3 37977236 38006349 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01286 876 955 Calmodulin-binding Proteins AT2G22960 35.802 1.57e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01286 - - sind:105169568 1206.05