Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01263 ATGTCCACAATGAATGAACGTCACATGGTCCCACTGGCGGTGCTGCTCAAGCGTGAGCTGACGAACGAGAAGATCGAGAATCCGGATATGTTATTCGGACAGGCCAGTCAGAGTAAGAAAGGTGAGGACTTCACATTATTCAAAACGAAATGCCAAAGGGTTCCAGGGGATGGGTCTACTACATTTTCGGTTTTCGCGCTATTTGATGGACACAATGGATCCGCAGCTGCTATATACTCTAAGGAGAATCTCCTGAATAATATTGTGGGTGCTATTCCTTCAGATCTTAGCAGAGATGAATGGTTAGCAGCGTTGCCAAGGGCTTTGGTTGCAGGATTTGTAAAAACTGATAAAGATTTTCAAGAGAAAGCACAATCGTCAGGAACAACTGTCACCTTTGTGATAATAGATGGATGGGTCATAACCGTAGCATCAGTCGGTGATTCCCGTTGCATACTTGAATCTGCTGAAGGTGCTTTATATTATTTGTCAGCAGATCATAGGTTGGAATGCAATGAAGAGGAGGGGGAACGTATAACGGCAAGTGGGGGTGAGGTTGGTCGGCTTAATACTGTTGGTGGTGCAGAGTTTGGCCCTTTGAGATGTTGGCCAGGTGGCTTGTGTCTTTCAAGATCCATTGGAGATATGGACATTGGGGAGTTCATTGTTCCTGTCCCCTATGTAAAGCAAGTGAAGCTGTCCACTGCTGGAGGTAGGCTTATCATCTCAAGTGATGGTGTCTGGGATGCTTTGTCCTCGGAAATGGCTCTGAATTGTTGTCGTGGGATGCCAGCGGATGCTGCAGCTGCTCACATTGTTAAAGAGGCTTTACAGTTGAAGGGACTTAGAGATGATACAACTTGCATTGTGATTGATATATTGCCACCAGAGAAGCTAATCACTCTCGTGCCACCAAAAAAGCAGGGGAAGGGAGCTTTCAAGTCCATGTTCCACAAAAAGTCATCGGAGTCTTCTTATTTAGAAAAAGAATATTCTGAGCCTGATGTGGTGGAGGAAATATTTGAGGAGGGATCTGCTATGCTTGCAGAAAGGTTTGATACGGAATATCCACTGTGCAACATGTTCAAGTTGTTCATGTGTGCAGTTTGTCAGGTAGAGATGAAACCCGGAGAGGGCATTTCGGTACATGCCGGTTCATCAAAACGGGGAAAATTGCGACCTTGGAATGGCCCTTTCCTCTGCTCGAGCTGCCAAGTGAAGAAAGAAGCCATGGAAGGGAAAAGACCGTCAGGAGGTGGTGCATCTAGAAATAGTAGTGGAAGATGCATTCTAAGGCCTCTCTAA 1305 0.4575 MSTMNERHMVPLAVLLKRELTNEKIENPDMLFGQASQSKKGEDFTLFKTKCQRVPGDGSTTFSVFALFDGHNGSAAAIYSKENLLNNIVGAIPSDLSRDEWLAALPRALVAGFVKTDKDFQEKAQSSGTTVTFVIIDGWVITVASVGDSRCILESAEGALYYLSADHRLECNEEEGERITASGGEVGRLNTVGGAEFGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSTAGGRLIISSDGVWDALSSEMALNCCRGMPADAAAAHIVKEALQLKGLRDDTTCIVIDILPPEKLITLVPPKKQGKGAFKSMFHKKSSESSYLEKEYSEPDVVEEIFEEGSAMLAERFDTEYPLCNMFKLFMCAVCQVEMKPGEGISVHAGSSKRGKLRPWNGPFLCSSCQVKKEAMEGKRPSGGGASRNSSGRCILRPL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01263 434 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Eupl03g01263 434 FunFam probable protein phosphatase 2C 12 32 299 - -
Eupl03g01263 434 SMART PP2C_4 21 291 IPR001932 -
Eupl03g01263 434 PANTHER PROTEIN PHOSPHATASE 32 292 IPR015655 GO:0004722|GO:0006470
Eupl03g01263 434 Gene3D - 31 299 IPR036457 -
Eupl03g01263 434 CDD PP2Cc 39 293 IPR001932 -
Eupl03g01263 434 Pfam Protein phosphatase 2C 54 266 IPR001932 -
Eupl03g01263 434 ProSiteProfiles PPM-type phosphatase domain profile. 43 293 IPR001932 -
Eupl03g01263 434 SMART PP2C_SIG_2 27 293 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01263 Eupl-Chr3 37559378 37588480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01263 1 425 PP2C-type Phosphatase Gene Family AT1G47380 77.049 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01263 - - ming:122062944 704.901