Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01245 ATGCAGAAATCTTCCAAAAGGCCCAAACGAGGCGGACTTCAAACGATCCAACCGTCTCCCTCGCAACGTCTGACCCAAGAACAAGAAATCTTAGTCATGGTGGATGCTCTCAAGCACGTCATCTCCGGTGGCATCGACGGCAATGGCAACCAGCTCGTAGATCAAATTCGGCTATCTTCAACAGTCGAGAGCGCCAGTACATCTTCCCCTGCCACCAGTAGGTCCAGTACTGACCAAGGAAGCACAGTTTTACCTCTTCCTGATGCTGACACTTGCCCATTATGTGGAATTGACGGTTGTCTGGGTTGCAATTTTTTCGCGCCATCTCAAGGGGAGAAGAAGAGGAAGAAGAAGAATTACCGTGGTGTTCGACAGAGGCCATGGGGCAAATGGGCAGCAGAGATAAGAGACCCTCGAAGAGCAACTCGTGTCTGGCTCGGCACGTTCGACACTGCAGAAGATGCCGCTCGGGCTTACGATAAGGCCGCCATTGATTTCCGTGGAGCCCGGGCAAAGCTCAATTTCCCGTTCCCTGACGATCCACCGAATCAAAATTCTCAACCCGAACAACAATTACAGCAACAGGAGGAAATAAAACCAGTGGTGGAGAAGCCACATATTGATCTCCCGTCACATTATTACTCGCAAAAGGAGACAGTGATGATGGCACCTGAAACCAGTAGACAAGAGACTGAATTCTGGGATAATGACGAGATAAGCTGGATATTAATGGAAAACGTCGACGAATTTCCCATTTCTATTTCTTCTGGAGCAACCGCGACCGTCGATCTTTCTCAATTGGATTCTTCCCTCTAA 816 0.4914 MQKSSKRPKRGGLQTIQPSPSQRLTQEQEILVMVDALKHVISGGIDGNGNQLVDQIRLSSTVESASTSSPATSRSSTDQGSTVLPLPDADTCPLCGIDGCLGCNFFAPSQGEKKRKKKNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEDAARAYDKAAIDFRGARAKLNFPFPDDPPNQNSQPEQQLQQQEEIKPVVEKPHIDLPSHYYSQKETVMMAPETSRQETEFWDNDEISWILMENVDEFPISISSGATATVDLSQLDSSL* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01245 271 ProSiteProfiles AP2/ERF domain profile. 119 176 IPR001471 GO:0003700|GO:0006355
Eupl03g01245 271 PANTHER DNA-BINDING DOMAIN 76 211 IPR044808 GO:0003700|GO:0009873
Eupl03g01245 271 CDD AP2 118 176 IPR001471 GO:0003700|GO:0006355
Eupl03g01245 271 PRINTS Ethylene responsive element binding protein signature 142 158 IPR001471 GO:0003700|GO:0006355
Eupl03g01245 271 PRINTS Ethylene responsive element binding protein signature 120 131 IPR001471 GO:0003700|GO:0006355
Eupl03g01245 271 Gene3D AP2/ERF domain 118 177 IPR036955 GO:0003700|GO:0006355
Eupl03g01245 271 SMART rav1_2 119 182 IPR001471 GO:0003700|GO:0006355
Eupl03g01245 271 MobiDBLite consensus disorder prediction 63 84 - -
Eupl03g01245 271 Pfam AP2 domain 119 168 IPR001471 GO:0003700|GO:0006355
Eupl03g01245 271 SUPERFAMILY DNA-binding domain 119 177 IPR016177 GO:0003677
Eupl03g01245 271 MobiDBLite consensus disorder prediction 1 25 - -
Eupl03g01245 271 MobiDBLite consensus disorder prediction 172 196 - -
Eupl03g01245 271 FunFam Ethylene-responsive transcription factor 2 118 177 - -
Eupl03g01245 271 MobiDBLite consensus disorder prediction 7 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01245 Eupl-Chr3 37337755 37338858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01245 18 179 AP2-EREBP Transcription Factor Family AT4G34410 46.040 1.03e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl03g01245 AP2 9.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01245 - - nnu:104601789 232.646