Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl03g01235 | ATGGAAGGTGGTGATGGTGGAATGAAGTTGGGGACTTTGAAGTTAAAAGAGGATCGTAATGGTGGTGGTGGACAATTTGTAGCGGAATCATCCATTTCAGATCCCGAAATTGCTGTTTCTTCACCGGTAACTAGACAAAAAGCCGCTGCTGCTAAGCGGTTTATTGAGAATCATTACAAGAATCATTTGCAAGGCCTTCAGGATCGTAAAGAGAGACGCTGGGCACTTCAAAGGATGGCACAAGAAGCACAAATTTCAAATGAAGAAGAGCAAGAGATGCTGAGGAATTTGGAGCGCAAGGAGACTGAGTATATGCGACTGCAAAGACATAAAGTTGGAATTGATGACTTTGATCAACTAACATTAATCGGCAGAGGTGCATTTGGTGAGGTAAGGCTCTGCCGTGCTAAAAGAACAGGAGAGATTTTTGCCATGAAGAAACTGAAGAAATCAGAGATGCTTAGTCGTGGACAGGTTGAGCATGTTAGGTCTGAGAGGAACCTGCTTGCTGAGGTTGATAGCCGGTGTATTGTACAACTTTTCTATTCATTCCAAGATTCTAATTTCTTGTACCTTATCATGGAATATTTACCTGGTGGTGACTTTATGACTCTTCTGATGAGAGAGGATGTTCTTTCTGAAGATGTTTCACGATTTTACATGGCCGAGAGCATTCTTGCAATTCATTCTATTCACCAGCATAACTATGTTCACAGGGACATAAAGCCAGATAACTTGTTACTGGATGAAAATGGCCATGTGAAACTCTCAGACTTTGGCTTGTGTAAACCTCTGGATTATAAATATTCAACAGTTTTATTGAATGAAGTCTTCACTATTCAAGAATCAACAACAGCTGAAACAGAAGGATATTCTGGGTGTGATACGTCCCCTTGGTCAATGCCAAAAGAACAGCTACAGCATTGGAAACGTAATCGTCGTGTATTGGCTTACTCTACTGTGGGAACTCTTGATTACATGGCTCCTGAAGTGCTTCTGAAGAAAGGTTACGGAATGGAGTGTGACTGGTGGTCTTTGGGGGCAATCATGTATGAGATGCTTATAGGCTATCCTCCCTTTTGCTCTGATGATCCAAGGATCACTTGCCGGAAGATAATTAACTGGAAAACATGCTTGAAATTCCCTGAGGAACCAAAAATATCAGATGATGCTAAGGATCTGATCTGTCATTTGCTATGTGATGTTGAAACAAGGCTGGGGACAAGAGGAGTGGAAGAAATAAAGGCACATCCATGGTTTAGAGGCATCCAATGGGACAAGGTGTATGAGATGGAAGCTGCCTACAAGCCTATTGTCAACGGAGAATTGGACACTCGAAATTTCGAGAAGTTTGAAGAAGTCGAAGGTCCATCAGCATTACCAAGCATGGGACCTTGGCGCAAGATGTTGACATCTAAAGATTCCAATTTCATAGGATATACTTACAAGAAATCAGATGTGCTAAAATCGCTTGGATCTTCAGGTACACAAATGAGTCTGAACAATTCTTCAGAGTCACCATCTCTTATTTCTTTGTTAGGCCGAATTGAACTGCAAGAAAGTGTGAACCTGGATGATGACCACAAACAGAGTACCTGA | 1599 | 0.4171 | MEGGDGGMKLGTLKLKEDRNGGGGQFVAESSISDPEIAVSSPVTRQKAAAAKRFIENHYKNHLQGLQDRKERRWALQRMAQEAQISNEEEQEMLRNLERKETEYMRLQRHKVGIDDFDQLTLIGRGAFGEVRLCRAKRTGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSNFLYLIMEYLPGGDFMTLLMREDVLSEDVSRFYMAESILAIHSIHQHNYVHRDIKPDNLLLDENGHVKLSDFGLCKPLDYKYSTVLLNEVFTIQESTTAETEGYSGCDTSPWSMPKEQLQHWKRNRRVLAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIINWKTCLKFPEEPKISDDAKDLICHLLCDVETRLGTRGVEEIKAHPWFRGIQWDKVYEMEAAYKPIVNGELDTRNFEKFEEVEGPSALPSMGPWRKMLTSKDSNFIGYTYKKSDVLKSLGSSGTQMSLNNSSESPSLISLLGRIELQESVNLDDDHKQST* | 533 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl03g01235 | 532 | FunFam | Non-specific serine/threonine protein kinase | 88 | 200 | - | - | |
| Eupl03g01235 | 532 | Gene3D | Transferase(Phosphotransferase) domain 1 | 312 | 440 | - | - | |
| Eupl03g01235 | 532 | Gene3D | Transferase(Phosphotransferase) domain 1 | 201 | 267 | - | - | |
| Eupl03g01235 | 532 | Pfam | Protein kinase domain | 118 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Eupl03g01235 | 532 | CDD | MobB_NDR_LATS-like | 51 | 112 | - | - | |
| Eupl03g01235 | 532 | FunFam | Non-specific serine/threonine protein kinase | 319 | 438 | - | - | |
| Eupl03g01235 | 532 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 34 | 475 | - | - | |
| Eupl03g01235 | 532 | CDD | STKc_NDR_like | 115 | 483 | - | - | |
| Eupl03g01235 | 532 | ProSiteProfiles | Protein kinase domain profile. | 117 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Eupl03g01235 | 532 | FunFam | Non-specific serine/threonine protein kinase | 201 | 268 | - | - | |
| Eupl03g01235 | 532 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Eupl03g01235 | 532 | ProSitePatterns | Protein kinases ATP-binding region signature. | 123 | 146 | IPR017441 | GO:0005524 | |
| Eupl03g01235 | 532 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 421 | 492 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
| Eupl03g01235 | 532 | SUPERFAMILY | Protein kinase-like (PK-like) | 94 | 471 | IPR011009 | - | |
| Eupl03g01235 | 532 | Coils | Coil | 76 | 110 | - | - | |
| Eupl03g01235 | 532 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 236 | 248 | IPR008271 | GO:0004672|GO:0006468 | |
| Eupl03g01235 | 532 | SMART | pkinase_C_6 | 421 | 484 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
| Eupl03g01235 | 532 | Gene3D | Phosphorylase Kinase; domain 1 | 80 | 200 | - | - | |
| Eupl03g01235 | 532 | SMART | serkin_6 | 117 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Eupl03g01235 | 532 | Pfam | Protein kinase C terminal domain | 439 | 482 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Eupl03g01235 | Eupl-Chr3 | 37158544 | 37198217 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Eupl03g01235 | 1 | 529 | AGC Kinase Gene Family | AT5G09890 | 72.128 | 0.0 | 797 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | AGC_NDR | Eupl03g01235 | Pkinase | 5.5e-65 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl03g01235 | K08790 | - | nnu:104601777 | 900.582 |