Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01214 ATGGCGATCTTCTCGGCTCCGTCAAAGCTTCTCCTCTTATGCTTCTGTCTCATCTATTACATAAGTTGCAGCAGCACATGGGTTGGAGCTCAGATCGACGATACGAGCTTGCAACTTATGAGAGACGCCCTCGAATGGCCATCGACCATGTCTCTTTACGAAGAGTTCAGTGACGAGGGGGACATAGATGGTGGAATTGGTCGGAGGTCTCTCTTCTGGCGAACAATGCACTACTACATCTCCTACGGTGCTCTCTCTGCAAATAGGATTCCATGCCCACCTCGCTCTGGGAGGTCTTACTACACTCACAACTGCTACAGAGCTAGAGGCCCTGTTCACCCATACACCAGAGGGTGTCCTCCTGTTTTTGCTATTGACATTTTACTTTTATGGATTGAGACGAAGAAAACGTTGTCTGCGAAGATAATTGAGAGAAAGCGAGCAAGGAAGAAGAAGAAGAAGAAGCAGGAACAACAGAGGGGAGATCTCGAGTTGATGGAGTGGGTAAGAGGGGAGATCATCGGCAGGGGAAGCTTCAGTACTGTAAATTTAGCAACCCCAAGAAGAGATTGCAGTAAAATTCCTCCTTTAATGGCTGTGAAATCTGCATTGGTTTCCCAATCATCTATGCTTCAGAAGGAAAAAGAAATACTAACCCATCTCAGTGGATGTCCTCAAATTCTCCGTTGTTTCGGCGACGATCACACCGTCGAAAATGGCGAAGAACTTTACAATGTCTTCCTTGAGCTCGCATCGAGAGGTAATCTAGCTGAGCTAATCAAGAATTCTGGAGGTTCAATACAGGAATCTGATGTCCAAAGCTACACAAGATCGATTCTTGAAGGCCTTTGTTACGTCCATGAGAAAGGCTATGTTCACTGTGATATCAAGTTGCAGAACATCCTTGTATGCTCTTCTCCTGATGGGCGAACTGAAGTTAAAATTGGGGACTTTGGACTTGCAAAGAAGGCTGGGAAGAAGAAGAATACAGAGTGTGGTGGGGTGTTCGGCTTGAGAGGTTCTCCTCTCTACATGTCACCGGAATCGGTTGCACGTAACGAGCACGAGCCACCTTCCGATGTATGGGCTCTCGGGTGCACCGTTGCAGAGATGATCACTGGGAAACCAGCCTGGAGGTGTCGCAGGGATGGGGATGTTAGTGCGTTATTGTTTCGGATTGGTTTTGGTGAAGAATTGCCGGAGATTCCAGAAAAATTATCAGAAAAGGGGAAGGATTTCTTGAGGAGGTGTTTTGTGAGAGATCCTACAAAGAGATGGACGACAGAGATGCTGTTGAATCATCCCTTTATTGCTGATGACATTGTTTCATTCTCAGAAATTGAGAAACCATCTCCATTTCCATCTCCAAGGAGCGCTTTTGATTTTCCTGAATGGAGTTCAAAGCAATCGTCGTATGCGAATTCAGTCGGATCTTCGCCGTCGGATTCATTTACTTCTTTTGAAGGAGAACTCGATCAATTGGATTGTTCTTCTTCGCCTTCTGCTTCTTCTCCTTCTCCGATCGAACGAATTCGGCAGCTGGCGAAGGGGCAACAGCTGAATTGGTCCTCATCAGACAGTTGGGTTATTGTGAGAAAGCATATTCCCCCTGTTTCTCAGTTAAAAGATTGA 1632 0.4614 MAIFSAPSKLLLLCFCLIYYISCSSTWVGAQIDDTSLQLMRDALEWPSTMSLYEEFSDEGDIDGGIGRRSLFWRTMHYYISYGALSANRIPCPPRSGRSYYTHNCYRARGPVHPYTRGCPPVFAIDILLLWIETKKTLSAKIIERKRARKKKKKKQEQQRGDLELMEWVRGEIIGRGSFSTVNLATPRRDCSKIPPLMAVKSALVSQSSMLQKEKEILTHLSGCPQILRCFGDDHTVENGEELYNVFLELASRGNLAELIKNSGGSIQESDVQSYTRSILEGLCYVHEKGYVHCDIKLQNILVCSSPDGRTEVKIGDFGLAKKAGKKKNTECGGVFGLRGSPLYMSPESVARNEHEPPSDVWALGCTVAEMITGKPAWRCRRDGDVSALLFRIGFGEELPEIPEKLSEKGKDFLRRCFVRDPTKRWTTEMLLNHPFIADDIVSFSEIEKPSPFPSPRSAFDFPEWSSKQSSYANSVGSSPSDSFTSFEGELDQLDCSSSPSASSPSPIERIRQLAKGQQLNWSSSDSWVIVRKHIPPVSQLKD* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01214 543 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 152 491 - -
Eupl03g01214 543 Pfam Protein kinase domain 170 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01214 543 Coils Coil 140 160 - -
Eupl03g01214 543 ProSitePatterns Protein kinases ATP-binding region signature. 174 201 IPR017441 GO:0005524
Eupl03g01214 543 Pfam Rapid ALkalinization Factor (RALF) 66 120 IPR008801 -
Eupl03g01214 543 Gene3D Transferase(Phosphotransferase) domain 1 162 476 - -
Eupl03g01214 543 CDD STKc_MAPKKK 167 437 - -
Eupl03g01214 543 SMART serkin_6 168 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01214 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Eupl03g01214 543 ProSiteProfiles Protein kinase domain profile. 168 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01214 543 SUPERFAMILY Protein kinase-like (PK-like) 167 484 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01214 Eupl-Chr3 36878052 36888616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01214 166 532 MAP Kinase Kinase Kinase AT4G36950 49.596 7.18e-108 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl03g01214 Pkinase 1.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01214 - - nnu:104606120 471.085