Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01208 ATGATGTCTGAGCACAAACCTGCGTTTCTTAACGATGAGCTATCAAAGAGAACCTCAATCTTTGGTCTTCGATTGTGGGTCATTTTGGGTATCTGTGTTGGAGCTGCGTTTGTTCTCCTCCTCTTTCTCATCTCGCTCTGGGTAACCTCAAAACGCAATAACGCCTCTAAACACAAGCTTTCCCCAAAACCCAATATCCCAAATGTGTCCAAAGAAATCCAGGAAGTTCAAATTGACCGTACCCGAGACCCAACTCACCACCATCACCAAGACGCCAAGCCTCTGCAACCTGAAATTCCGCCCAACCCGGTACCCGAATCGGAACCAATTGGTCTACTTGAGAGGCGAGCGTTGCTTATTCCCCTGGAGGAAGAGAGCTCATTTGGGATTCATAGAATTCAGATTGAGATCGGGAAGAATCACCGGATTTCGTACCCGGAACGCGGTAGGGGTGCTGCGCGTTCGGTTGATCAGGTCCCGATAGTGGTTCCTGAGGTGTCGCATTTGGGTTGGGGGCATTGGTATACTCTCAGAGAGCTTGAGGCCTCGACAAATGGGTTTGCTGATGAGAACGTGATCGGTCAAGGTGGGTATGGGATCGTTTATCGCGGCGTCTTGGAGGATAGTAACCAGGTTGCTGTCAAGAATTTGCTCAATAACAGGGGACAAGCTGAGAGGGAGTTTAAGGTTGAAGTCGAGGCAATTGGACGTGTTCGGCATAAGAATTTAGTGAGGTTACTTGGCTATTGTGCTGAAGGAGCTCATAGGATGCTTGTTTACGAGTATGCGGACAATGGAAACTTAGAACAGTGGCTTCATGGGGATTTAGGGCCTTACAGCTCCCTTACATGGGAGATTCGTATGAACATTATTCTTGGGACAGCAAAAGGGTTGACATATCTTCATGAGGGGCTCGAACCCAAGGTCGTTCACCGTGATGTTAAATCGAGCAACATTTTGCTCGATAAGCAGTGGAACCCGAAGGTATCTGACTTTGGGCTTGCGAAACTATTGGCCTCAGAGAGGAGCTACGTCACAACCCGCGTGATGGGAACCTTTGGCTATGTAGCTCCTGAATATGCTAGTACAGGCATGTTGAATGAGCGAAGTGATGTGTATAGTTTTGGGATTCTTATTATGGAGATAATTTCTGGTAGAAGCCCTGTTGATTACAGTCGGCCTCCGGGTGAGGTTAACCTGGTAGAGTGGCTTAAAATGATGGTTACAAACCGGAATGCTGAGGGAGTGTTGGATCCCAAGATACATGCGAAACCTTCTTCGAGGGCATTGAAACGGGCCCTTTTAGTAGCTTTAAAATGCGTGGACCCAGACGGTCAAAAGAGGCCAAAGATGGGGCACGTAATACATATGCTCGAAGTCGATGATTTCCCCTTGCGAGATGACCGTCGAGTTGGGCGGGACCCAGGACATGTACATCGTGATGGTTTGAACCGGATGGTGGAATCGGGTGATAGTAGTGGGTACGAAAGTGGCACCCAAACCAATAGGACAAGATGGAAAAAGAAAGAATGCAACGAGCAATAG 1545 0.4816 MMSEHKPAFLNDELSKRTSIFGLRLWVILGICVGAAFVLLLFLISLWVTSKRNNASKHKLSPKPNIPNVSKEIQEVQIDRTRDPTHHHHQDAKPLQPEIPPNPVPESEPIGLLERRALLIPLEEESSFGIHRIQIEIGKNHRISYPERGRGAARSVDQVPIVVPEVSHLGWGHWYTLRELEASTNGFADENVIGQGGYGIVYRGVLEDSNQVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYADNGNLEQWLHGDLGPYSSLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDVKSSNILLDKQWNPKVSDFGLAKLLASERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIISGRSPVDYSRPPGEVNLVEWLKMMVTNRNAEGVLDPKIHAKPSSRALKRALLVALKCVDPDGQKRPKMGHVIHMLEVDDFPLRDDRRVGRDPGHVHRDGLNRMVESGDSSGYESGTQTNRTRWKKKECNEQ* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01208 514 FunFam Putative receptor-like serine/threonine-protein kinase 263 473 - -
Eupl03g01208 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Eupl03g01208 514 ProSitePatterns Protein kinases ATP-binding region signature. 193 215 IPR017441 GO:0005524
Eupl03g01208 514 CDD STKc_IRAK 193 459 - -
Eupl03g01208 514 MobiDBLite consensus disorder prediction 80 103 - -
Eupl03g01208 514 MobiDBLite consensus disorder prediction 469 486 - -
Eupl03g01208 514 Gene3D Phosphorylase Kinase; domain 1 165 262 - -
Eupl03g01208 514 SMART serkin_6 187 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01208 514 Gene3D Transferase(Phosphotransferase) domain 1 264 466 - -
Eupl03g01208 514 MobiDBLite consensus disorder prediction 469 514 - -
Eupl03g01208 514 PANTHER OS01G0323000 PROTEIN 8 470 - -
Eupl03g01208 514 ProSiteProfiles Protein kinase domain profile. 187 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01208 514 MobiDBLite consensus disorder prediction 80 94 - -
Eupl03g01208 514 Pfam Protein kinase domain 188 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01208 514 SUPERFAMILY Protein kinase-like (PK-like) 168 461 IPR011009 -
Eupl03g01208 514 FunFam Probable serine/threonine-protein kinase At1g01540 167 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01208 Eupl-Chr3 36811214 36814783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01208 163 509 Trihelix Transcription Factor Family AT1G70460 43.182 6.95e-86 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Eupl03g01208 Pkinase 3.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01208 - - nnu:104601747 840.106