Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01201 ATGGGGGAACCAACGAATCCAAATGCGCCTCCCATCTCACGGCTACCCGGTTTTCGATTCCGTCCCACCGAAGAACAGCTCTTCTGTTGCTATCTCTGCAACAAGAACCACAATCACTCCCTTCTTTCTACTTCTAACAATCCGTTTTTCGATTTCGATGTCATTCGAGAGATCGATTTGTACAACTACGACCCTTGGGACCTTCCGGAGATTGCGTTTTTTTCGTTCGGGAATGGCGGAAGTAAGAAGCACTTGTATTGTTTTACAGAGAAGGTGACGAGTGAGGATTCGAAACGGAAAGCCAAGACTGGGTTCTGGAAGAGCAAGGGTCGTGCTCGTGATGTTTTTGGTGGAAAAGAAGGAGCCTTGTTGGGGACTAAGAGGGTTTTTGTGTTTTACCTAGAGAATTCGTCGGTCTCGATCAAGACTAATTGGGTCATGAACGAATATGCCCTCGTCAATGATCATCAGAAGGATTCTTTGGTCCTTTGTCGAGTATTCGTTAAATCTCGCAGTGGAAATAAAATAGCGGAGCATGTCCCAAGTTCTAATGCTGAAGAAAGCATTGCTGCAACGCACGACATTTGTATTGATGTTCCTTGTAAAAAGCATAATGGAGCCTCAACATCAGGAATTGGTGTTGTACCGGCACCGCATGAGGCAACCTCAGTTGATACAGACAATGAGATCAAGAGGTTTCCATTGAAATTGACGTGTGATGACCCGATTGTGACCAGACCTGTTTCTGATGATGACTTTGGGTCACCCGTGGGCATTCCACAACCCAATCAGCTGGCTAAATACTCTGATGTTATCAATGATGGTGTCAATTTTGGCGATGCTGTGGCACGTGAGCTAATGATCAATTCTGCAATTCTAGAGGGAGATTTCATAGAGTTAAATGATCTGCACTTGGCATTGATTCCTCAGGATAAATGA 939 0.4483 MGEPTNPNAPPISRLPGFRFRPTEEQLFCCYLCNKNHNHSLLSTSNNPFFDFDVIREIDLYNYDPWDLPEIAFFSFGNGGSKKHLYCFTEKVTSEDSKRKAKTGFWKSKGRARDVFGGKEGALLGTKRVFVFYLENSSVSIKTNWVMNEYALVNDHQKDSLVLCRVFVKSRSGNKIAEHVPSSNAEESIAATHDICIDVPCKKHNGASTSGIGVVPAPHEATSVDTDNEIKRFPLKLTCDDPIVTRPVSDDDFGSPVGIPQPNQLAKYSDVINDGVNFGDAVARELMINSAILEGDFIELNDLHLALIPQDK* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01201 312 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 184 - -
Eupl03g01201 312 ProSiteProfiles NAC domain profile. 14 169 IPR003441 GO:0003677|GO:0006355
Eupl03g01201 312 SUPERFAMILY NAC domain 11 169 IPR036093 GO:0003677|GO:0006355
Eupl03g01201 312 Gene3D NAC domain 23 173 IPR036093 GO:0003677|GO:0006355
Eupl03g01201 312 Pfam No apical meristem (NAM) protein 16 152 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01201 Eupl-Chr3 36646673 36661147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01201 11 177 NAC Transcription Factor Family AT3G15500 35.000 2.91e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl03g01201 NAM 3.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01201 - - tss:122660833 295.049